Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4076 273 3e-68 seq3622 183 4e-41 >seq4076 Length=468004 Score = 273 bits (302), Expect = 3e-68 Identities = 927/1435 (65%), Gaps = 27/1435 (2%) Strand=Plus/Minus Query 75713 TTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGT 75772 || || | ||| ||||| || || | |||| ||||| || ||||| |||||| | ||| Sbjct 422283 TTCACCACTTGGAATTCACCTGAAATCACTCGGCGAGTATAGATATTGCTGGTAAAAGGT 422224 Query 75773 TCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACC 75832 || || ||||||||||| || ||||||| || || ||||| |||||| | | Sbjct 422223 TCTGTGGACTCATTGTTTCCAAATATTTGAGATGTGGATGCAGTGGGCATACAAGTAGTC 422164 Query 75833 AATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAA 75892 |||| ||| || | | |||| | || || || || || | | ||||||||| Sbjct 422163 AATAGACTGTTACGTAAGCCATATTTTGAAATATTTTCCTTCAAGCCATCCCAATCCCAT 422104 Query 75893 AGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGAT 75952 | |||||||||| || |||| | ||||||||| ||||| || | || || || Sbjct 422103 AAATCTGATGGTGTTACTCCCCACATATCGTATTGAAGAATCCCTTGACTCGCTGGGGAG 422044 Query 75953 CCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCT-AGTTCGCAACTCGCCTCTAACGC 76011 || | ||| ||||| |||| || | ||||| ||| | |||||| | ||| | || Sbjct 422043 CCTTCATAAGTTTCATAAGGACCATGCTTTT-GGCTCAATTCGCATGAAGACTCAAGGGC 421985 Query 76012 ACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAA 76071 | | | ||| ||||| || ||||| || |||||||| || || ||||| ||| || Sbjct 421984 AGCATGATAGATTGTCTCAAAAATTTTTTTATTAAGTTCATGGGCTTCCTCTGAATCGAA 421925 Query 76072 AGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCT 76131 ||||||| | | || | | | ||||| || | || ||||| || || ||||| ||||| Sbjct 421924 AGGATAACGCATAATTACATACGCATCAGCCAAACCTTGAACACCTATCCCAATTGGTCT 421865 Query 76132 ATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTT 76191 ||| | |||| || || ||||||| |||| ||||||| | ||| || | ||| Sbjct 421864 ATGACGACTATTAGATCTTCCAGCTTCAGGAACAGGGTAAAACGAGCGATCAATGACTTT 421805 Query 76192 ATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTT-GAGAAAATCAA------ 76244 || | ||| || | |||| | || | ||||| |||| | || Sbjct 421804 GTTCATATTAACAGTAATGATTTTAGTAATTTCGTGAAGTTTCTTGAAATTGAAGGTGGG 421745 Query 76245 ATTTTCCA---TC-TATCACAAACATATT----AAGAGCTATAGATGCTAGATTACAAAC 76296 |||| | || ||| || ||||| ||| | || || | ||| || || Sbjct 421744 ATTTGATAATTTCTTATTGTCAATATATTTAGGAAGCGAAATGGAACACAAATTGCACAC 421685 Query 76297 GGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGAT 76356 || ||||| | || | |||| | ||||| |||||||||||||| | ||||| Sbjct 421684 AGCAGTTTCATTGGGATCGCTGTATTCGACAATCTCGGTGCATAGATTACTTGATTTGAT 421625 Query 76357 AGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGG 76416 |||||| || | |||||| || || ||||| || | || || || | || ||| || Sbjct 421624 GACTCCAAGGTTCTTTTGGTTACTTTTCTTGTTGCAGGCATCTTTGTAGACAATAAATGG 421565 Query 76417 AGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTAT 76476 || ||||| || || | || | || || ||| | | ||||||| | | Sbjct 421564 TTGACCTGTTTCGATTTGGGCATCCACTATTGAGAACCACAGTTTTTGGGCTTTTACTTT 421505 Query 76477 AGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCA 76536 | | || ||||| ||| || | |||| | || || ||||| ||||| | Sbjct 421504 CTGTACGAATTTTTTCTCAGATTCGTAGCGCATATAGAGCCTCTCGAATTCTTCTCCGTA 421445 Query 76537 AACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT 76596 | || | || |||||| ||| |||||||||| |||| || || ||||||| Sbjct 421444 ACTGTCTGATAGGCCGGGACATGCATGAGGACACATCAGACACCAGTCCCCGTCTTCCTC 421385 Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACG 76656 ||| | |||||| || | ||| || ||||| ||||| | ||||| ||| | || ||| Sbjct 421384 AACTCTTTTCATGAACAAATCCGGCATCCAAAGAGCGAGAAATAAATCCCTGGCCCTAAC 421325 Query 76657 TTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGG 76716 ||| || ||| |||||||| | || || ||||| || | |||||||| ||||| || Sbjct 421324 TTCCTCGGCTCCCGTATTCTTCCTGAGTTCAAGGAATTCGAAAATATCAGCGTGCCAGGG 421265 Query 76717 TTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGC 76776 ||| ||||| || || | | || || | || ||||| || ||||| | || | || Sbjct 421264 TTCAAGATAAATAGCAAAAGATCCTGGCCTCTTGTTACCACCTTGATCGACGTAACGGGA 421205 Query 76777 AGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGA 76836 | ||| || | || || | |||||| | | |||||||| || || ||||||| Sbjct 421204 TGCGTTGTTGAATACCCTAAGCATTGGTACGAGACCGTTAGAAGTGCCGCACGTTCCAGC 421145 Query 76837 AATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTT 76896 ||| | ||| | || ||||| || | | || || ||||| || || || Sbjct 421144 TATAAATGAACCAGAGGCTCGAATGTTGTGCACATGTAACCCGATTCCACCAGCATACTT 421085 Query 76897 AGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT 76956 ||| || || || |||||||||| | || |||| || || ||||| |||| Sbjct 421084 AGAAATGGCCGCGCATTCGCTCAATGTGTCGAAAATACCCTTGATGCTGTCATCTTTCAT 421025 Query 76957 GTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT----CCTGCATTAAACAATG 77012 | || | || || |||| || || |||||| || ||||| ||||||| Sbjct 421024 GGCAATCAAGAAGCAACTAGCCAACTG----GCCACAGTTCGAACCAGCATTGAACAATG 420969 Query 77013 TAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTT 77072 | || | || || ||| | | |||||| | || | ||| || | | || || Sbjct 420968 TCGGGGTAGCGTGTGTGTAGTAGGCTTCAGACAAGAGGTCGTAGGTGGACAAAGCTTGTT 420909 Query 77073 CTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTC 77126 | ||||| || | || ||| | || ||||| | ||| | |||||| || |||| Sbjct 420908 CAATATCATCAAGGTTG-ATTGCAACTGCGACCCTCATGAGCATATGTTGGGGTC 420855 >seq3622 Length=296610 Score = 183 bits (202), Expect = 4e-41 Identities = 446/683 (65%), Gaps = 77/683 (11%) Strand=Plus/Minus Query 46612 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAAT 46671 ||||| ||||||| || ||||| |||||| |||||| || ||||| || || || | | Sbjct 278346 AAATGACTAAACATCAAGCATGCGAAATCAGTATGAAGTCCCTCATCCCTGCTGATGAGT 278287 Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 || ||| || | | |||||||||| ||||||||||| | |||||| || || || Sbjct 278286 TCATTACTGAAGGCCAAGCCAGGCATTAAACCACGCTTTTTTAACCAAAAAATGGCAGCA 278227 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 || || ||||||||||| || ||||| |||| || || || || | ||| | |||| Sbjct 278226 AATGAACCAGAAAAGAAAATTCCTTCGACAG-AGCAAAGGCAACTACCCTCACATTGTAA 278168 Query 46792 -CTGGCATCATTATGA-----------------------ATCCACCTTTGAGCCCAATCA 46827 || | |||| || ||||| | ||||||||| | Sbjct 278167 GGTGCCTATATTAGGATAATATATACTCTACTTTGATCGATCCATTTGAGAGCCCAATTA 278108 Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGttttt---ttCA 46884 |||||||| ||||| || | ||||| | |||| |||| || || | |||| Sbjct 278107 GCCTTTTTAGCAACACATGGTAACGTTTCAACAGCACGAAAG---AACTTCATACGTTCA 278051 Query 46885 TCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCA 46944 || |||||||||| ||||| || || |||||||| ||||| || ||||||| ||||||| Sbjct 278050 TCTATATCTTTAACGTATGTGTCGATCAAAAGACTGTACATCTCCGAATGAACGTTTTCA 277991 Query 46945 ATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAAT 47004 | ||||| ||| |||||||| ||| | | |||||||| | || ||||| ||||| Sbjct 277990 ACAGCCACCTGGAATCCGTAGAAAAAACGTGCTTCAGGTGTTTGAGCCTCT-CGCAAAAA 277932 Query 47005 CG-TTCAGAC------------------------AAATTCTCATTCACTATTCCATCACT 47039 || ||||| | | ||| || |||||||| |||||||| Sbjct 277931 CGTTTCAGCCTGAATAATAAGGGAAGATCTTACTAGATTTTCGTTCACTATCCCATCACT 277872 Query 47040 AGCAGCAAAAAATGCCAATACATGTTTAATAAAAT-ATTTTTCATCGG----TA------ 47088 ||||||||||| || | || | ||| |||| | || | ||| || Sbjct 277871 CGCAGCAAAAAAAGCGAGCACGTAAGAAATGAAATGACGTTCCCCCGGCTTTTAAATAAA 277812 Query 47089 ---------GTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCT 47139 ||| || ||| |||| || || || |||| ||| || ||||| | Sbjct 277811 CGAAAAACCTTCAAATTCGCCCAATCATCGAGGTCCTTAGATAAATCCACCTCTTCGACA 277752 Query 47140 GTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGA 47199 ||||| || || ||| | || ||||| || | | ||| |||||| | || | ||| ||| Sbjct 277751 GTCCAAAACGAAGCCACCGCCTTTTTGTAGAATTCCCAAATATCATGGTAGTTGATAGGA 277692 Query 47200 AAAATAACAAATCTATTTGGATT 47222 || ||||| || | ||| ||||| Sbjct 277691 AAGATAACGAAACGATTAGGATT 277669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712883095458240