Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq1304 100 2e-16 >seq1304 Length=23161 Score = 100 bits (110), Expect = 2e-16 Identities = 246/366 (67%), Gaps = 9/366 (2%) Strand=Plus/Plus Query 96709 AAACCGTGAGTATTGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGGCCATTTCGTTG 96768 |||| | | ||||| || | ||| || | ||| || || |||| || | || || Sbjct 1520 AAACAGCGTGTATTTTCCATCAAACTGCACTTTCAGGGTTCCGGTTGGCCCCTGGCGCTG 1579 Query 96769 CTTTCCGATAATTACCTCGGCAATGCCCTT--CATTTCGCTATCCGGGTGATAAACTTCG 96826 || | ||| || | ||| || |||||| || || | | || | || |||||| || Sbjct 1580 TTTACTGATGATGATCTCTGCC-TGCCCTGGACAGTTAG-TGTCGGCGTTATAAACCTCA 1637 Query 96827 TCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCACGTAAA 96886 || | || | ||| | |||||||| || |||||||||| || || || ||||| | | Sbjct 1638 TCCCTGTAGATAAAGCTAATCAGGTCAGCATCCTGCTCAAGCGCGCCGGAATCACGAAGA 1697 Query 96887 TCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAGTTGTGACAAT 96946 || ||| || ||||| || || || ||||| | | |||||||| || || | Sbjct 1698 TCGCCATTATTAGGGCGTTTATCAGCGCGTTGTTCTACCTGACGATTAAGCTGAGAGAGC 1757 Query 96947 GCCACCACCGGTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAATCTCGGCA 97006 || | ||||| | ||| || |||| ||||| || || || ||||||||||| Sbjct 1758 GCAAGTACCGGGCAGCCGAGTTCTTTGCCCAATGCCTTAAGAGAACGTGAAATCTCGGCG 1817 Query 97007 ATTTCCAGCGTTCGGTTATCTTGCAGCTCCGGGAC-GCGCATAAGTTGCAGGTAGTCGAT 97065 |||||| |||| ||||| || || || |||| || | ||| ||||| || ||||| Sbjct 1818 ATTTCCTGCGTACGGTTCTC---CA-TGCCAGGACAACGTACAAGCTGCAGATAATCGAT 1873 Query 97066 CATAAT 97071 ||| || Sbjct 1874 CATGAT 1879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330875982974662