Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3622 125 7e-24 >seq3622 Length=296610 Score = 125 bits (138), Expect = 7e-24 Identities = 309/464 (67%), Gaps = 36/464 (8%) Strand=Plus/Minus Query 23219 TTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTT 23278 ||||||||||||| || || |||||||||||||||| || || || | ||| || | Sbjct 278639 TTTGATATTCCCCGACGCGCTTTTCGAAAAAATTTGTTTTTCCTTCCATTGAGATCAGAT 278580 Query 23279 CCATAAAATCAAATGGATTAGAAGTATTATATA-CAGCTTTACATGATA-ATTCCTTTA- 23335 |||| ||||| |||||||| || ||| | | | | | || | | | | | ||||| Sbjct 278579 CCATGAAATCGAATGGATTTTCAGCATTGAAGATCTGGTGTAAAAAAAAGAGTACTTTAT 278520 Query 23336 --------------AA----AGCCTATCTGCTACAAATTCAATATATTGACACATCA-AA 23376 || || | ||| || ||||| |||||||||| |||||| || Sbjct 278519 CGAAACCAAGGGCCAACATGAGGCGATCAGCGACAAACTCAATATATTTGCACATCTCAA 278460 Query 23377 TCATAGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATG 23436 | | || || || || | | || || | || ||| || || |||||| || Sbjct 278459 TGGCA-TTCATTCCGATCAAACTCACAGGTAGTGCTTCAGTCAAAAACTCTTTTTCGATT 278401 Query 23437 GAAACAGCATCTT---TAATTATTTGAACAATAACTTCTTCACTAGGTGGATATT---TT 23490 ||| ||||| ||||| ||||||| | | || | | ||| | || Sbjct 278400 TCAACTGCATCCACAATAATTCTTTGAACCAGAGATTGT------GATGGTTTCACGGTT 278347 Query 23491 AAATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAAT 23550 |||| |||||| || ||||| |||||| ||| || || |||||||| || || | | Sbjct 278346 AAATGACTAAACATCAAGCATGCGAAATCAGTATGAAGTCCCTCATCCCTGCTGATGAGT 278287 Query 23551 TCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA 23610 |||||| || | || || |||||||| || || ||||| | |||||| || |||||| Sbjct 278286 TCATTACTGAAGGCCAAGCCAGGCATTAAACCACGCTTTTTTAACCAAAAAATGGCAGCA 278227 Query 23611 AATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCAC 23654 ||||| || ||||||||||| || || |||| |||||||| || Sbjct 278226 AATGAACCAGAAAAGAAAATTCCTTCGACAG-AGCAAAGGCAAC 278184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521450472419800