Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelohanellus_20kitauei_20[genbank_20GCA_5F000827895.1_202015-01-23] 5,757 sequences; 150,348,159 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq567 105 6e-18 >seq567 Length=338301 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||| || |||||||| || ||||| |||| || |||||||| ||||| || Sbjct 136342 TCCTTCTGGATATTATAGTCACTCAGAGTGCGGCCGTCTTCAAGCTGCTTACCGGCAAAA 136401 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGA 41790 ||||| | |||||| || | ||||| | ||||| || ||| | || | ||||| | Sbjct 136402 ATCAGTCTCTGTTGATCAGGGGGAATTCCTTCCTTATCT-TGAATCTTAGACTTCACAGT 136460 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | |||| |||| | | |||||| |||| || || || ||||| || | || || || Sbjct 136461 CTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTTACCGGTTAAGGTTTTCAC 136520 Query 41851 GAAAATCTGCAT 41862 |||||||||||| Sbjct 136521 GAAAATCTGCAT 136532 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || ||||| ||||||||||| || ||||| | || || || ||||| ||||| || Sbjct 137047 TCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAA 137106 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 ||||| | ||| || |||| ||||| | ||||||||| ||| || ||| | | | Sbjct 137107 ATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTTAGACTTAACAGTC 137166 Query 41792 GACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 |||| ||| | | ||| || || | || || |||||||| || || || || ||| Sbjct 137167 TCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTTTACCAGTGAGTGTTTTGACG 137226 Query 41852 AAAATCTGCAT 41862 ||||| ||||| Sbjct 137227 AAAATTTGCAT 137237 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 || ||||| ||||||||||| || ||||| | || || || ||||| ||||| || Sbjct 137731 TCTTTCTGGATGTTATAGTCACTCAGAGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAA 137790 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 ||||| | ||| || |||| ||||| | ||||||||| ||| || ||| | | | Sbjct 137791 ATCAGTCTCTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTTAGACTTGACAGTC 137850 Query 41792 GACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 |||| ||| | | ||| || || | || || |||||||| || || || || ||| Sbjct 137851 TCAACAGAGTCATTGGGCTCAACATCGAGAGTGATTGTTTTACCAGTGAGTGTTTTGACG 137910 Query 41852 AAAATCTGCAT 41862 ||||| ||||| Sbjct 137911 AAAATTTGCAT 137921 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| |||||||| || || || ||| | ||||| | || || Sbjct 137485 ACCAAGTGGAGAGTGGATTCCTTCTGGATATTGTAATCGCTTAAAGTGCGACCATCCTCA 137544 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| || || ||||| ||||| | |||||| || | ||||| | |||||||| || Sbjct 137545 AGCTGTTTTCCTGCGAAAATCAGTCTCTGTTGATCTGGGGGAATTCCTTCCTTGTCT-TG 137603 Query 41774 ATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | | || | || || | | |||| |||| | | |||||| |||| || || || || Sbjct 137604 AATCTTAGATTTTACCGTCTCAACAGAGTCGTTGGGCTCCACATCCAGAGTAATTGTCTT 137663 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || | || || |||||||||||||| Sbjct 137664 ACCGGTTAAGGTTTTCACGAAAATCTGCAT 137693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462270731448400