Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1412 95.1 2e-14 >seq1412 Length=9661127 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 135760 AGAGCCTGGGATACAAACAAACCACTCATTTTCTGTCCTGCAATGAATACTCTTATGTGG 135819 |||||||||||| || |||| ||||||||||||| || |||||||||| ||||||| Sbjct 1095108 AGAGCCTGGGATTTGAAACGACCAGTCATTTTCTGTCCAGCTATGAATACTCATATGTGG 1095167 Query 135820 GAACATCCTATTACAGAAAAACATATAGATACGTTAAAATATATGGGTTTCATAGAAATA 135879 ||||||| || || || ||||||| | || ||| || | || | ||| ||| | Sbjct 1095168 AAACATCCAATAACTAGTAATCATATAGCGATATTGAAAAATTTTGGATACATTGAAGTC 1095227 Query 135880 GAATGCATAGaaaaaaaaCTAGCATGTGGAGA 135911 ||| || || ||| ||| |||||||| || Sbjct 1095228 GAACCAATTGAGAAACGACTGGCATGTGGTGA 1095259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923180482496560