Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq646 95.1 2e-14 >seq646 Length=1920 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 35365 AATTCTCTTTTATGAATATCTGGTTTCaaaaaaaGATTTATAGATTGACTTTGATCTATA 35424 ||||| ||||| |||||| | | | ||||| ||||| ||||||| ||| |||| Sbjct 1211 AATTCAGATTTATCAATATCAGCTGGAATAAAAATATTTAAAGATTGAGCCTGACTTATA 1270 Query 35425 TATTTTTGACGATCTGCAGCATGTTTGATTACCCATTTTTGATTAATTTCAAATGCGGTT 35484 || | |||||||||||||| |||| ||||| |||||| |||||||| || ||| Sbjct 1271 TAAGGAGTTCTATCTGCAGCATGTTCAATTAGCCATTGTTGATTTATTTCAAAAGCAGTT 1330 Query 35485 TTAAATACCTGTTTTTC 35501 |||||||| | |||||| Sbjct 1331 TTAAATACATCTTTTTC 1347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679802384280480