Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1402 84.2 2e-11 >seq1402 Length=1917717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 36863 TCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTG 36922 |||| ||||||||||||| ||||| | || || | | || | | | |||| || Sbjct 1405219 TCCAGGCGTAAAAATGCATGCTGGTTAACTTCGCAAAATTGGGCTCAGCAATATGTACGT 1405160 Query 36923 TCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATT 36982 | | ||||||||||||||| || | || || | || |||||||| || | | | Sbjct 1405159 TAAATGATTGACTTTGATCAATGTAAGCTCCCCGATCAGCTGCCATATCGATCAAGGTTC 1405100 Query 36983 TTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTA 37033 ||||||| || ||||| || |||||||||| ||| |||| |||||||| Sbjct 1405099 TTTGAGAAATTTCCCATACGGTTTTATATAACGCTTTAATATCATCTGGTA 1405049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468516518824160