Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1402 98.7 1e-15 >seq1402 Length=1917717 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||||||||||| || |||| || | | || | || || || ||||| | | Sbjct 1405219 TCCAGGCGTAAAAATGCATGCTGGTTAACTTCGCAAAATTGGGCTCAGCAATATGTACGT 1405160 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 | | |||||||||||||| ||| | ||||||| || || ||||| | || | || Sbjct 1405159 TAAATGATTGACTTTGATCAATGTAAGCTCCCCGATCAGCTGCCATATCGATCAAGGTTC 1405100 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTT 65080 |||| | ||||||||| | |||||||| ||| | |||||||| ||||| | ||| Sbjct 1405099 TTTGAGAAATTTCCCATACGGTTTTATATAACGC-TTTAATATCATCTGGTATGTT 1405045 Score = 89.7 bits (98), Expect = 7e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 66397 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 66456 |||| |||||||||||| ||| ||||||||||||||||||| | ||| | | | | Sbjct 1402340 CCTCAATACTATCATCCGACATTGTAAGTAGAAAACAGCTAGATAATTGAGGTCTGCAGG 1402281 Query 66457 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT 66516 | || |||||||| | || || |||||||| |||||||| ||| || | || ||| | Sbjct 1402280 TACCAGCATTAAAAAGCGTTGGCGAAGCGTGTGTAAACCAACGTTCGGACATTAAATTAT 1402221 Query 66517 ACGTCTCAA 66525 | |||| || Sbjct 1402220 ATGTCTGAA 1402212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658161166795760