Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1402 95.1 2e-14 >seq1402 Length=1917717 Score = 95.1 bits (104), Expect = 2e-14 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||| |||||||| || |||| || | | || | || || || ||||| | | Sbjct 1405219 TCCAGGCGTAAAAATGCATGCTGGTTAACTTCGCAAAATTGGGCTCAGCAATATGTACGT 1405160 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 | | |||||||||||||| ||| | ||||||| || || ||||| | || | || Sbjct 1405159 TAAATGATTGACTTTGATCAATGTAAGCTCCCCGATCAGCTGCCATATCGATCAAGGTTC 1405100 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTT 78959 |||| | ||||||||| | |||||||| ||| | |||||||| ||||| | ||| Sbjct 1405099 TTTGAGAAATTTCCCATACGGTTTTATATAACGC-TTTAATATCATCTGGTATGTT 1405045 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/132 (76%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || || |||||||| ||||| || | | || |||||||| || ||||| || || | Sbjct 1404668 ACCTGGAATTCTCCTGACAAAACACGTCTAGAATAAATATTGCTTGTATACGGCTCAATT 1404609 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 ||||| ||||| || | ||||||||||| || ||||||||||| || || | | ||| Sbjct 1404608 GATTCGTTATTACCAAGGATTTGAGCAGTAGAAGCCGTTGGCATTGGAGCTAATAGTAAG 1404549 Query 79180 CTATTTC-TAAG 79190 ||||||| |||| Sbjct 1404548 CTATTTCGTAAG 1404537 Score = 84.2 bits (92), Expect = 3e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 80276 CCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 80335 |||| || |||||||| ||| ||||||||||||||||||| | ||| | | | | Sbjct 1402340 CCTCAATACTATCATCCGACATTGTAAGTAGAAAACAGCTAGATAATTGAGGTCTGCAGG 1402281 Query 80336 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT 80395 | || |||||||| | || || |||||||| |||||||| ||| |||| || ||| | Sbjct 1402280 TACCAGCATTAAAAAGCGTTGGCGAAGCGTGTGTAAACCAACGTTCGGACATTAAATTAT 1402221 Query 80396 ACGTCTCAA 80404 | |||| || Sbjct 1402220 ATGTCTGAA 1402212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718256104598960