Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1414 87.8 2e-12 >seq1414 Length=13260704 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/191 (72%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 7063 GGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGT-TAT 7121 ||||||||||||| || | ||||| || ||||| ||| | ||||| |||||| | ||| Sbjct 6093755 GGATTCCAAGCAGACAAGATGATACGCCTGTCATTGGGACTGGTTTT-AATTTTATGTAT 6093813 Query 7122 AATTATTTGTAA-TTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAAT 7180 | | | | || |||||||| ||| || || || | | ||| ||| | || | Sbjct 6093814 TACT-TCAGCAAGTTGATCTACACCTTGTCCAGTGTAGTCGGCATGCATATTGGTGTACT 6093872 Query 7181 TAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGAT 7240 | || || ||||||| ||| ||||| ||||| ||||| ||||||||||| |||| | | Sbjct 6093873 TTGCGCCGAAATGTCGCCACTGAAAACCATAGATAGGTCCTAAATCACCAACTTCCCTTT 6093932 Query 7241 GATTAAATCCT 7251 || |||||| Sbjct 6093933 CATGCAATCCT 6093943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595861467962400