Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1402 98.7 1e-15 >seq1402 Length=1917717 Score = 98.7 bits (108), Expect = 1e-15 Identities = 129/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| ||||||||||||| || |||| || | | || | || || || ||||| | | Sbjct 1405219 TCCAGGCGTAAAAATGCATGCTGGTTAACTTCGCAAAATTGGGCTCAGCAATATGTACGT 1405160 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 | | |||||||||||||| ||| | ||||||| || || ||||| | || | || Sbjct 1405159 TAAATGATTGACTTTGATCAATGTAAGCTCCCCGATCAGCTGCCATATCGATCAAGGTTC 1405100 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTT 62236 |||| | ||||||||| | |||||||| ||| | |||||||| ||||| | ||| Sbjct 1405099 TTTGAGAAATTTCCCATACGGTTTTATATAACGC-TTTAATATCATCTGGTATGTT 1405045 Score = 82.4 bits (90), Expect = 1e-10 Identities = 98/132 (74%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || || |||||||| ||||| || | | || |||||||| || |||||||| || | Sbjct 1404668 ACCTGGAATTCTCCTGACAAAACACGTCTAGAATAAATATTGCTTGTATACGGCTCAATT 1404609 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 || || ||||| || | ||||||||||| || || || ||||| || || | | ||| Sbjct 1404608 GATTCGTTATTACCAAGGATTTGAGCAGTAGAAGCCGTTGGCATTGGAGCTAATAGTAAG 1404549 Query 62457 CTATTTC-TAAG 62467 ||||||| |||| Sbjct 1404548 CTATTTCGTAAG 1404537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622936189408240