Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1375 113 4e-20 >seq1375 Length=284262 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || ||||| || || ||||| || ||||| || ||||| ||| Sbjct 62959 CCACCACGAAGACGCAATACCAAGTGGAGTGTGGATTCTTTTTGGATATTGTAATCGCTT 63018 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| |||||||||||||| || | ||||| |||||||| || ||| Sbjct 63019 AATGTACGGCCGTCTTCCAATTGTTTGCCAGCGAATATAAGTCGCTGTTGATCTGGAGGA 63078 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| |||||||| ||| | |||||| | | | || || | || ||| | Sbjct 63079 ATGCCTTCTTTGTCTTGAATCTTTGACTTCACGTTTTCAATGGTATCACTTGGTTCCACT 63138 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||||| || | |||||||| ||||||||||| Sbjct 63139 TCCAAAGTGATGGTTTTTCCAGTTAAAGTTTTGACGAAAATCTGCAT 63185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405081019067860