Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1408 96.9 4e-15 >seq1408 Length=5881857 Score = 96.9 bits (106), Expect = 4e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 154939 TTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGAC 154998 |||||||| ||| || |||||||| | ||||| |||||| | || ||||| || || Sbjct 3460772 TTCATGACTTTGGGGGCCAGGTATACATGGATGGTGCAAATATGAACGCACAAGTTGGTA 3460831 Query 154999 TAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCT 155058 || || | || | ||| || ||||| | ||||| ||||||||||| ||||| | Sbjct 3460832 TATGCCGCCCGGGAGACTTTGGAGCTGATGTTTCCCATCTTAACTTACATAAGACATTTT 3460891 Query 155059 GTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | ||||| ||||| ||||| ||||| || | ||||| || || || Sbjct 3460892 GCATTCCTCATGGCGGTGGTGGTCCAGGAATGGGTCCAATTGGAGT 3460937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579202562413760