Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1375 95.1 8e-15 >seq1375 Length=284262 Score = 95.1 bits (104), Expect = 8e-15 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || || |||| ||| |||||| || ||||||||||| || | || |||| ||| Sbjct 62749 ACTAAATGAAGAGTGGATTCTTTTTGGATGTTATAGTCGCTTAGCGTGCGGCCATCTTCC 62808 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | || || || || || || || |||||||| ||| | || | || || ||||| | Sbjct 62809 AATTGCTTACCAGCGAAAATAAGACGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGA 62868 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || |||||| | | || | |||| | || || || | ||| ||||||||| Sbjct 62869 ATTTTGGATTTGACATTTTCGATAGTATCACTTGGTTCGACTTCTAAGGTAATGGTTTTT 62928 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| | |||||| ||||| ||||||||| Sbjct 62929 CCCGTTAAAGTCTTGACAAATATCTGCATA 62958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324628005548592