Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1408 114 1e-20 >seq1408 Length=5881857 Score = 114 bits (126), Expect = 1e-20 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | || ||||| ||||| ||||| ||||| || |||||||||||| Sbjct 3460937 ACTCCAATTGGACCCATTCCTGGACCACCACCGCCATGAGGAATGCAAAATGTCTTATGT 3460878 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 || || ||||| | ||||| || ||| |||| | || || ||| || ||||| Sbjct 3460877 AAGTTAAGATGGGAAACATCAGCTCCAAAGTCTCCCGGGCGGCATATACCAACTTGTGCG 3460818 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA 138348 || | |||||||||||| | |||||||| || ||| |||||||| Sbjct 3460817 TTCATATTTGCACCATCCATGTATACCTGGCCCCCAAAGTCATGAA 3460772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578988166203280