Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1375 122 2e-22 >seq1375 Length=284262 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || ||||| || || | || | ||||| ||||| ||||| Sbjct 62956 ATACCACCACGAAGACGCAATACCAAGTGGAGTGTGGATTCTTTTTGGATATTGTAATCG 63015 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||| | || |||| ||||||||||| ||||| || || | || |||||| || || Sbjct 63016 CTTAATGTACGGCCGTCTTCCAATTGTTTGCCAGCGAATATAAGTCGCTGTTGATCTGGA 63075 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| || || || || || || ||||| | ||| Sbjct 63076 GGAATGCCTTCTTTGTCTTGAATCTTTGACTTCACGTTTTCAATGGTATCACTTGGTTCC 63135 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | ||| |||||||| |||||||| ||||| | ||| |||||||| Sbjct 63136 ACTTCCAAAGTGATGGTTTTTCCAGTTAAAGTTTTGACGAAAATCTGCAT 63185 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | |||||||| | ||| | ||||| || ||||| || Sbjct 62728 ATCCCACCACGAAGACGAAGCACTAAATGAAGAGTGGATTCTTTTTGGATGTTATAGTCG 62787 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || | || |||||||| |||||||| ||||| | | || || || ||| Sbjct 62788 CTTAGCGTGCGGCCATCTTCCAATTGCTTACCAGCGAAAATAAGACGTTGCTGATCTGGT 62847 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| ||||| ||| ||||| |||||||| | ||| Sbjct 62848 GGGATACCTTCTTTGTCTTGAATTTTGGATTTGACATTTTCGATAGTATCACTTGGTTCG 62907 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||||||||||| || ||||| || || | ||||||||||| Sbjct 62908 ACTTCTAAGGTAATGGTTTTTCCCGTTAAAGTCTTGACAAATATCTGCAT 62957 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| |||| |||||||| | || | ||||| || ||||| || Sbjct 62500 ATACCACCACGAAGACGTAGCACTAAATGAAGTGTGGATTCTTTTTGGATGTTATAGTCG 62559 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || | || || ||||| |||||||| ||||| | | || || || ||| Sbjct 62560 CTTAGTGTGCGGCCATCTTCTAATTGCTTACCAGCGAAAATCAGACGTTGCTGATCTGGT 62619 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| ||||| ||| ||||| |||||||| | ||| Sbjct 62620 GGGATACCTTCTTTGTCTTGAATTTTTGATTTGACATTTTCGATAGTATCACTTGGTTCG 62679 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | ||||| ||||||||||| | ||| || | ||| |||||||| Sbjct 62680 ACTTCCAAGGTAATTGTTTTACCAGTGAGTGTCTTGACGAAAATCTGCAT 62729 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 171852 AGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGT 171911 || || || || | ||||||||| | |||||| || || || || |||| || Sbjct 63424 AGACGCAAGACAAGATGTAAAGTCGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGG 63483 Query 171912 TCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCT 171971 | || || || ||||||||||| ||||| || | ||||| || ||||| |||||||| Sbjct 63484 CCATCTTCTAACTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCC 63543 Query 171972 TTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTA 172031 ||||| || || || ||| ||||| |||||||| | || ||||| | |||| Sbjct 63544 TTATCCTGGATCTTGGATTTGACATTTTCGATAGTATCGCTTGGCTCAACTTCCAAAGTA 63603 Query 172032 ATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| || || || ||||| | ||| || ||||| Sbjct 63604 ATGGTTTTTCCTGTCAAAGTTTTGACGAAAATTTGCAT 63641 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || |||||||| || || | | || || || ||||| || ||||| ||| Sbjct 62347 TCTTCCAACTGCTTACCAGCGAAGATGAGACGTTGCTGATCTGGTGGAATACCTTCCTTA 62406 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| ||||| ||| ||||| |||||||| | ||| ||||| | ||||| Sbjct 62407 TCTTGAATTTTGGATTTGACATTTTCGATAGTATCACTTGGTTCGACTTCCAAGGTAATT 62466 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||||||| | ||| || | ||| |||||||| Sbjct 62467 GTTTTACCAGTGAGTGTCTTGACGAAAATCTGCAT 62501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905120001721200