Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1408 102 1e-15 >seq1408 Length=5881857 Score = 102 bits (112), Expect = 1e-15 Identities = 167/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| || |||||||| || |||||||||| | |||| ||| ||| ||| Sbjct 2222211 TGTATTTGGTGACAGCTTTGGTACCTTCGCTGACGGCGTGCTTAGCCAATTCACCGGGCA 2222270 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || |||||||| || || | | || | || |||||||| Sbjct 2222271 AGAGAAGACGAACAGCGGTCTGAATTTCCCTGCTGGTAACGGTAGAACGCTTGTTGTATT 2222330 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| |||| || || || |||| || |||| || || | || || ||||||| Sbjct 2222331 GAGCCAAGCGGGAAGCTTCATTGGCGATACGTTCGAAGATATCTTGAACGAAAGAGTTCA 2222390 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||| || ||||||||| || || || | || |||| Sbjct 2222391 TGATGCTCATGGCCTTGCTGGAGATTCCAGTGTCGGGGTGAACTTGTTTCAAAACTTTGT 2222450 Query 1485710 A 1485710 | Sbjct 2222451 A 2222451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916095986370746