Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1375 105 4e-18 >seq1375 Length=284262 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||||||||| ||| |||| |||| |||| |||||| || ||||| Sbjct 62767 TCTTTTTGGATGTTATAGTCGCTTAGCGTGCGGCCATCTTCCAATTGCTTACCAGCGAAA 62826 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || |||||||| ||| | || | || || ||||| | ||||| |||||| | Sbjct 62827 ATAAGACGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTTGGATTTGACATTT 62886 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | | ||||| || | ||| ||||| |||||||| | ||||| ||| Sbjct 62887 TCGATAGTATCACTTGGTTCGACTTCTAAGGTAATGGTTTTTCCCGTTAAAGTCTTGACA 62946 Query 34967 AAGATCTGCAT 34977 || |||||||| Sbjct 62947 AATATCTGCAT 62957 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||||||||| ||| |||| |||| || | |||||| || ||||| Sbjct 62539 TCTTTTTGGATGTTATAGTCGCTTAGTGTGCGGCCATCTTCTAATTGCTTACCAGCGAAA 62598 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| |||||||| ||| | || | || || ||||| | |||||| |||||| | Sbjct 62599 ATCAGACGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTTTGATTTGACATTT 62658 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | | ||||| || | ||| || || || || ||||| ||||| || Sbjct 62659 TCGATAGTATCACTTGGTTCGACTTCCAAGGTAATTGTTTTACCAGTGAGTGTCTTGACG 62718 Query 34967 AAGATCTGCAT 34977 || |||||||| Sbjct 62719 AAAATCTGCAT 62729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325687187295266