Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1375 91.5 1e-13 >seq1375 Length=284262 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||||||||| ||||| ||||||||||| | ||| ||| | || Sbjct 63641 ATGCAAATTTTCGTCAAAACTTTGACAGGAAAAACCATTACTTTGGAAGTTGAGCCAAGC 63582 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| ||| | || ||| ||||| ||||| ||||| | || ||||| Sbjct 63581 GATACTATCGAAAATGTCAAATCCAAGATCCAGGATAAGGAAGGAATTCCACCAGATCAA 63522 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | | |||| || ||||||||| | || || | | || || ||||||||| Sbjct 63521 CAACGTTTGATTTTCGCTGGTAAACAGTTAGAAGATGGCCGTACTTTGAGCGACTACAAC 63462 Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758 || || || ||||| || || || Sbjct 63461 ATCCAGAAAGAGTCGACTTTACA 63439 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| |||||||||||||| || |||||||| || | ||| ||| | | Sbjct 63185 ATGCAGATTTTCGTCAAAACTTTAACTGGAAAAACCATCACTTTGGAAGTGGAACCAAGT 63126 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || || ||||||| || ||||||||| | || ||||| Sbjct 63125 GATACCATTGAAAACGTGAAGTCAAAGATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 63066 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| ||||||| | || || ||||| |||| |||| | ||| | || ||||| Sbjct 63065 CAGCGACTTATATTCGCTGGCAAACAATTGGAAGACGGCCGTACATTAAGCGATTACAAT 63006 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 || ||||| || || || | ||| |||| ||| Sbjct 63005 ATCCAAAAAGAATCCACACTCCACTTGGTATTG 62973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398869926106246