Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq188 158 4e-33 >seq188 Length=1128 Score = 158 bits (174), Expect = 4e-33 Identities = 421/637 (66%), Gaps = 31/637 (5%) Strand=Plus/Plus Query 188959 GGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATT 189018 || ||| | ||||| |||||| | |||||||| | |||||||| ||||| |||| || Sbjct 2 GGGATTATTTATATTGATGAAATTGATAAAATATCCAGAAAATCTGAAAGTCCATCAATA 61 Query 189019 ACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACA 189078 || |||||||| ||||| || ||||| || || || | |||||| | || |||||||| Sbjct 62 ACACGAGATGTTTCTGGAGAGGGAGTTCAACAGGCGCTGTTAAAATTAATGGAAGGTACT 121 Query 189079 GTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATA 189138 ||||| |||| ||||||||||| | || || || || |||||| | | |||| Sbjct 122 GTTGCATCTATTCCACCTCAAGGTGGAAGAAAGCATCCCCAACAAGAATTTTTGCAAATT 181 Query 189139 GATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTATC 189198 |||| | ||||| || ||| | | ||||| ||| ||||||||| || || || Sbjct 182 AATACTAAAAATATATTATTTGTCTGCAGCGGAGCTTTTAGTGGTCTTGATAAAATAATT 241 Query 189199 AA-GAGACGCGCTACAAA-AT-CAACTTTAGGTTTTGATG--ATAGT-GTAGATAAAGTA 189252 || ||| | | ||| || || | |||||||| | ||||| | |||||| Sbjct 242 AATCAGA---GAAAGAAAGATAGTTCTATTGGTTTTGAAGCAATAGTAAAAAATAAAG-- 296 Query 189253 CAAGAAGA--------AATCAAGGATGACAATAAAGTATTCCAACATCTTCAACCGCAAG 189304 | ||||| ||||| ||| || ||| | | || |||| | | Sbjct 297 -ATGAAGATTCTTCTGTATCAA--ATGTCATTAATG---------GTGTTGAACCAGAGG 344 Query 189305 ATATTGTTAAGTATGGTTTAATTCCAGAATTTATTGGGCGTGTACCAGTAATCGCAACTC 189364 || | ||||| |||||||| ||||| || ||||||||| | | ||| | || | ||| Sbjct 345 ATTTAGTTAAATATGGTTTGATTCCTGAGTTTATTGGGAGGTTGCCATTGATTGTTACTA 404 Query 189365 TTAACAAACTTGATCGAGATGCATTGATTAACATTTTAACTGAGCCGCAAAACGCTATCA 189424 | || | |||||| | | ||||| | ||||||| ||||| |||| || | | Sbjct 405 TAAATGATCTTGATGAATCTATGTTGATAAGAATTTTAAAAGAGCCAAAAAATTCTTTAA 464 Query 189425 TTAAACAATATCAGAAATTGTTAGATATGGATGGCGTGGAATTAGAATTCCAAAAAGAAG 189484 || | |||||||| ||||| || ||| | ||| | ||||| | || | || | | Sbjct 465 TTCAGCAATATCAAAAATTATTTGATTTAAATGATATTAAATTAAATTTTGAGGAAAATG 524 Query 189485 CATTAGAATCAATTGCAGATGAAGCGATTGAACGTAATACTGGTGCTCGCGGATTACAAT 189544 |||| || ||| || | || | || | || |||||||| | || ||| | Sbjct 525 CATTTAAAGAAATAGCTAAAATTGCTTTCAAAAGAAAAACTGGTGCCAGAGGTTTAAGAG 584 Query 189545 CCATTATTGAAAATATTATGTTAGATGTAATGTATGA 189581 | || | ||||||||| | | ||| |||||| ||| Sbjct 585 CAATATTGGAAAATATTTTACTTGATTTAATGTTTGA 621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591881559558272