Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1375 105 6e-18 >seq1375 Length=284262 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 ||||| ||||| || ||||||||||||| | || ||| ||| || | || |||| Sbjct 62989 GTGGATTCTTTTTGGATATTGTAATCGCTTAATGT--ACGGCCGTCTTCCAATTGTTTGC 63046 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||| || || ||||| |||||||| ||||| |||||| || Sbjct 63047 CAGCGAATATAAGTCGCTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATCTTTGACT 63106 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| || || | || ||||| || | |||| |||||| || || | || Sbjct 63107 TCACGTTTTCAATGGTATCACTTGGTTCCACTTCCAAAGTGATGGTTTTTCCAGTTAAAG 63166 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| |||||||||||||| Sbjct 63167 TTTTGACGAAAATCTGCAT 63185 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCT 133515 ||||| || ||||||||||| || ||||| |||| || || | | | || || | || Sbjct 63438 ATGTAAAGTCGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCA-TCTTCTAACT 63496 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || ||| |||| | || || || || || || || |||||||| || ||||| Sbjct 63497 GTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCCTTATCCTGGATCT 63556 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | |||| | || | || ||| | ||||| || || | || | |||||| || | Sbjct 63557 TGGATTTGACATTTTCGATAGTATCGCTTGGCTCAACTTCCAAAGTAATGGTTTTTCCTG 63616 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 ||| |||||| |||||||| |||||| Sbjct 63617 TCAAAGTTTTGACGAAAATTTGCATG 63642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483412255537360