Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1375 134 1e-26 >seq1375 Length=284262 Score = 134 bits (148), Expect = 1e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| || | ||||| | |||||||| || |||||||||||||||| ||||| | Sbjct 63427 CGCAAGACAAGATGTAAAGTCGACTCTTTCTGGATGTTGTAGTCGCTCAAAGTACGGCCA 63486 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||||||||| | | || | ||| ||||||||||| || || ||||| ||| Sbjct 63487 TCTTCTAACTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCCTTA 63546 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || ||| | | ||| | ||||||| | ||||| ||||| | || | Sbjct 63547 TCCTGGATCTTGGATTTGACATTTTCGATAGTATCGCTTGGCTCAACTTCCAAAGTAATG 63606 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 ||||| || |||| |||||| | |||||| ||||||| Sbjct 63607 GTTTTTCCTGTCAAAGTTTTGACGAAAATTTGCATGA 63643 Score = 123 bits (136), Expect = 2e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| ||||||||||||||||| | | || ||||| || |||||||| ||||||| || Sbjct 63192 ACGTAAGCGCAAAACCAAATGAAGTGTCGATTCTTTCTGGATGTTGTAATCGCTCAGAGT 63251 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| |||||||| || | | |||| ||| || ||||| || || || || Sbjct 63252 GCGACCATCTTCTAGCTGTTTGCCAGCGAAAATTAAACGTTGCTGATCGGGTGGAATACC 63311 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 |||||| || |||||| ||| | | ||| | || || | || |||||||| | Sbjct 63312 TTCTTTGTCTTGAATTTTGGATTTGACGTTTTCAATGGTGTCACTGGGTTCCACTTCTAA 63371 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | |||||| ||||| | ||| || | ||||| |||||| Sbjct 63372 GGTAATCGTTTTGCCAGTTAAAGTCTTGACAAAAATTTGCATG 63414 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | || |||||||| || ||||| ||||| | ||||| Sbjct 62971 CGCAATACCAAGTGGAGTGTGGATTCTTTTTGGATATTGTAATCGCTTAATGTACGGCCG 63030 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||||| || | | || || ||||||||||||||||| ||||||||||| Sbjct 63031 TCTTCCAATTGTTTGCCAGCGAATATAAGTCGCTGTTGATCTGGAGGAATGCCTTCTTTG 63090 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| ||| |||| | ||| | ||||| | || |||||||| | || | Sbjct 63091 TCTTGAATCTTTGACTTCACGTTTTCAATGGTATCACTTGGTTCCACTTCCAAAGTGATG 63150 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||| | |||||| | |||||||||||| Sbjct 63151 GTTTTTCCAGTTAAAGTTTTGACGAAAATCTGCAT 63185 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | | || || ||||| |||||||||||||| | || || | Sbjct 62287 CGCAGTACCAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGCTTAGCGTGCGACCA 62346 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||| ||||| | |||| ||||| || |||||||| || || ||||| ||| Sbjct 62347 TCTTCCAACTGCTTACCAGCGAAGATGAGACGTTGCTGATCTGGTGGAATACCTTCCTTA 62406 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| ||| | | ||| | |||||| | || || ||||| | || | Sbjct 62407 TCTTGAATTTTGGATTTGACATTTTCGATAGTATCACTTGGTTCGACTTCCAAGGTAATT 62466 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||||| || || || | |||||||||||| Sbjct 62467 GTTTTACCAGTGAGTGTCTTGACGAAAATCTGCAT 62501 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || |||||||| ||||| |||||||| | || || |||||| | || ||||| | Sbjct 62536 GATTCTTTTTGGATGTTATAGTCGCTTAGTGTGCGGCCATCTTCTAATTGCTTACCAGCG 62595 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||| || |||||||| || || |||||||| || ||||||| ||| | Sbjct 62596 AAAATCAGACGTTGCTGATCTGGTGGGATACCTTCTTTGTCTTGAATTTTTGATTTGACA 62655 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | |||||| | || || ||||| | || | ||||||||||| || || || Sbjct 62656 TTTTCGATAGTATCACTTGGTTCGACTTCCAAGGTAATTGTTTTACCAGTGAGTGTCTTG 62715 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 62716 ACGAAAATCTGCAT 62729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476602775897040