Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1375 89.7 5e-13 >seq1375 Length=284262 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||| | ||| |||||||| | || || || || |||||||||||| | Sbjct 63187 CCACCACGTAAGCGCAAAACCAAATGAAGTGTCGATTCTTTCTGGATGTTGTAATCGCTC 63246 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || ||||| || || || || || || || ||||| || | ||| Sbjct 63247 AGAGTGCGACCATCTTCTAGCTGTTTGCCAGCGAAAATTAAACGTTGCTGATCGGGTGGA 63306 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | || |||| | ||| ||| | || | || | | ||||| || | |||||| Sbjct 63307 ATACCTTCTTTGT-CTTGAATTTTGGATTTGACGTTTTCAATGGTGTCACTGGGTTCCAC 63365 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | || |||||||| || || ||||| || ||||| || ||||| Sbjct 63366 TTCTAAGGTAATCGTTTTGCCAGTTAAAGTCTTGACAAAAATTTGCAT 63413 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | | ||| || | |||||| || ||| || || |||||||| ||| | Sbjct 63415 CCGCCACGGAGACGCAAGACAAGATGTAAAGTCGACTCTTTCTGGATGTTGTAGTCGCTC 63474 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || | ||| ||||| || || ||||| || || || || | ||| Sbjct 63475 AAAGTACGGCCATCTTCTAACTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 63534 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| || | | || | | || ||||| | || || Sbjct 63535 ATTCCTTCCTTATCCTGGATCTTGGATTTGACATTTTCGATAGTATCGCTTGGCTCAACT 63594 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || ||||| || ||||||||||| || || || ||||| Sbjct 63595 TCCAAAGTAATGGTTTTTCCTGTCAAAGTTTTGACGAAAATTTGCAT 63641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450785632223120