Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoplax_20adhaerens_20[refseq_20GCF_5F000150275.1_202008-06-17] 1,414 sequences; 105,631,681 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1375 93.3 3e-14 >seq1375 Length=284262 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || ||||||||||||||||| ||| || ||| | || ||| Sbjct 62293 ACCAAGTGAAGTGTAGATTCCTTTTGGATGTTGTAGTCGCTTAGCGTGCGACCATCTTCC 62352 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || || ||||| | ||| |||||||||| || | ||||||||| || Sbjct 62353 AACTGCTTACCAGCGAAGATGAGACGTTGCTGATCTGGTGGAATACCTTCCTTATCTTGA 62412 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || || | || | || || || | ||| || |||| ||||| || || Sbjct 62413 ATTTTGGATTTGACATTTTCGATAGTATCACTTGGTTCGACTTCCAAGGTAATTGTTTTA 62472 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| ||||| || ||||| Sbjct 62473 CCAGTGAGTGTCTTGACGAAAATCTGCAT 62501 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||| |||| ||||| || || || ||||||||||||||| || ||| | || Sbjct 63201 CAAAACCAAATGAAGTGTCGATTCTTTCTGGATGTTGTAATCGCTCAGAGTGCGACCATC 63260 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || ||||| || || || || || ||||| |||||||| | || | |||||| || || Sbjct 63261 TTCTAGCTGTTTGCCAGCGAAAATTAAACGTTGCTGATCGGGTGGAATACCTTCTTTGTC 63320 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 || || || | || | |||||||| || |||||| || | |||||||| Sbjct 63321 TTGAATTTTGGATTTGACGTTTTCAATGGTGTCACTGGGTTCCACTTCTAAGGTAATCGT 63380 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || | ||||| || || ||||||||| Sbjct 63381 TTTGCCAGTTAAAGTCTTGACAAAAATTTGCATG 63414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359984196240438