Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2528 140 3e-28 >seq2528 Length=14935 Score = 140 bits (154), Expect = 3e-28 Identities = 378/571 (66%), Gaps = 12/571 (2%) Strand=Plus/Plus Query 16194 ACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAA 16253 |||| || || ||||||||||| || || |||||||| | ||| || || || |||| Sbjct 5069 ACATGAGGCAGGCGAAGTCGCAGTGAAGGCCTTCGTCGCGCGAGATGAGCTCATTCGAAA 5128 Query 16254 AAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCC 16312 | | || || ||||| || || ||||| | |||||| || | |||| || || || Sbjct 5129 AGCTCAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGG-AGCAGAAGGAGCCA 5187 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGC-ATC 16371 || ||||| || || || |||| || || || | | ||||| ||||| | ||| || Sbjct 5188 GAGAAGAAAATGCCTTCGACAGCAGCGAAGGCAACGATGCGTTCGGCGTAAGCAGCGATT 5247 Query 16372 T--TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTT 16429 | || || | ||| || | |||| | ||| || | | | ||| ||||| Sbjct 5248 TGGTTGTTGCA---CCACTTGAGCGCCCACTGGGCCTTGCGCTGGACACACGGGATCGTG 5304 Query 16430 TCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGT 16489 || ||||| | || || || || | || | || ||||| ||||| ||| Sbjct 5305 TCGATGGCGCGGAGCACGCGGTCCTTCTCAACCGTGTCCTTGATGTACGTGTCAATAAGT 5364 Query 16490 AAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGA 16549 | ||| | ||| ||||| ||||| || || || |||||||| ||||||||||| ||| Sbjct 5365 AGCGAGTAGACTTCGGAGTGGATGTTTTCAATAGCGATCTGAAAGCCATAGAAGCAACGA 5424 Query 16550 GCCTCCGCTATTTGTACTTCCACGTAAAATCGTTC--CGCCAGGTTCTCATTCACGATAC 16607 || || | | || ||||| | | || |||| |||| ||||||||| || || | Sbjct 5425 GCTTCAGGCACCTGAACTTCGTTGGAGAA--GTTCATGGCCAAGTTCTCATTTACAATGC 5482 Query 16608 CGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAA 16667 ||||| || || || ||||| | | |||| | ||||| | |||| || | Sbjct 5483 CGTCAGACGCGGCGAAGAACGCAAGCACGTGCGTGATGAAGAAGCGCTCGTTGTCCGTGA 5542 Query 16668 GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAG 16727 | | | ||| || || | ||| | | | ||| | |||||| | ||||| ||||| | Sbjct 5543 GCTTCTCCCAGTCCTTCAGATCGTGGACGAGATCGAGTTCTTCGGCTGTCCAGAAGCTCG 5602 Query 16728 CCACTGCCTTTTTATACATTTTCCAAATATC 16758 || | ||||| || ||||||| ||| | ||| Sbjct 5603 CCTCGGCCTTCTTGTACATTTCCCACACATC 5633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511394825613840