Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1616 147 3e-30 >seq1616 Length=68031 Score = 147 bits (162), Expect = 3e-30 Identities = 609/984 (62%), Gaps = 134/984 (14%) Strand=Plus/Minus Query 145536 TTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTC 145595 ||| || ||||| ||||| ||||||| ||||| ||| |||| ||||| |||||| Sbjct 57435 TTACACGGCCATTTCCATCTTGATGGCCTTCTGGGGCGAGTACCCCTGCAGCGTAAAGTC 57376 Query 145596 CTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAG--GATCCTGAGCCTGGGAAAG 145653 ||| ||| || |||||| | | || | ||| | ||| | || || Sbjct 57375 CTCGAAGACGAACGAGTCGATGTCCGTCTT--GGCTGGGTTGATGCGTAGCGTCGGGAAC 57318 Query 145654 GGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGC 145713 ||| || ||| | |||||| || || |||||||||||||| ||| || ||| Sbjct 57317 GGCGTTGGCGTCCGCGCCAGCTGCTCCTGGAGCGGCTCCACGTGGTTCGAGTACACATGC 57258 Query 145714 GCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATG 145773 ||||| || | |||||||||||||| || | |||||| | || |||| |||| Sbjct 57257 GCGTCGCCGATCACGTGGATGAAGTCGCCAGCGCGGAGGCCGCACACCTGCGCGATCATG 57198 Query 145774 TAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAG 145833 || ||||| | |||||| || ||||||||||| || || || |||||||| | ||| Sbjct 57197 CGCGTAAGCAGCGCGTAGCTCGCGATGTTGAAGGGGACGCCGAGGCCCATGTCGGCGGAG 57138 Query 145834 CGCTGGTAC---------------------------------------AGCTGGCAGGAG 145854 ||||||||| | |||||| || Sbjct 57137 CGCTGGTACATCTACGCAGCGCTTAGCGCCTCGCATTCCGCCGCCCGCACCTGGCACGAC 57078 Query 145855 AGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT---G 145911 ||||| || ||| ||||| |||||||| | | |||||| |||||||||||||| | Sbjct 57077 AGCTCGCCATTCGCAACGTAAAACTGGCAGAACATGTGGCACGGCGGCAGGGCCATCAAG 57018 Query 145912 GCG-------------------GGCAGGT------------------CCGCCGGGTTCCA 145934 || ||| ||| ||| ||||||||| Sbjct 57017 CCGAGATCTACGCCACCGCTGAGGCCGGTGCTGCGCGCGCCTCGTACCCGACGGGTTCCA 56958 Query 145935 GGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCT 145994 ||| | ||| | | | | | || || |||||||| || | ||| Sbjct 56957 GGCCGAGAGAAGAATACGACGGTCGTCCGGCGAGTGCTTGATCTTGTGGATGACGTCTGC 56898 Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 ||||||||| |||||||| ||| ||| || || | ||| ||||||| |||||| || Sbjct 56897 GAGCTGGTCGACGCCCTGGCCCGAGTAGTCGGTGTGCATGTCGACGTACGTGGCCCCAAA 56838 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC------CC 146108 ||| | ||| ||||| |||||||||||||| ||||| ||| ||| | ||| || Sbjct 56837 GTGGCGCCATTGGAAGCCGTAGACGGGCCCGAGGTCGCCGACCTCGCGCTGCGTTAACCC 56778 Query 146109 CAGCC-----------------CGGCC--CGGG-----------------CGAGGAAGTC 146132 ||| ||||| |||| ||||||| || Sbjct 56777 GAGCNNNNNNNNNNNNGGTGAGCGGCCGGCGGGGCTGGCGGCACACTTGTCGAGGAACTC 56718 Query 146133 CCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGT 146192 || || |||||| ||||||||||||||| ||| | | |||| |||| || || Sbjct 56717 GCGCGAGCCGTTGCCGTCCCAGATCTTGATGCCTTTGTCCTGGAGCGTCTTGGCGTTGGT 56658 Query 146193 GGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGT 146252 | || ||||||||||| |||||||| || ||| ||| ||||||| || | |||||| Sbjct 56657 GTTGCCGCTGATGAACCACAGCAGCTCCTCAGCGACGCCCTTCCAGAACACGCGCTTGGT 56598 Query 146253 GGTCAGCAGGGG---GAACTGGCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGA 146309 || ||||| || || | | |||||| | | ||| | ||||||| || Sbjct 56597 CGTGAGCAGCGGAAAGACGTCGTGGCGCAGGTTGAAGCGCATCTGCGCGCCGAAGAGCGA 56538 Query 146310 CAGGGTGCCCACGCCCGTCCTGTCCCCCCTGCGCACCCCGTTCGCCAGGATCTCCCTGAC 146369 ||||||||| |||||| | ||| ||| ||||||| || | | || |||| || | Sbjct 56537 GAGGGTGCCCGTGCCCGTGCGGTCACCCTTGCGCACGCCCTCCTGGAGAATCT---TGTC 56481 Query 146370 GGTG---TTGAGGTACTGGTGCTC 146390 | || | ||||||||| |||| Sbjct 56480 GATGAGCTCGAGGTACTGCCGCTC 56457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590054214810480