Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq389 113 4e-20 >seq389 Length=167588 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | |||| || | ||| | ||| ||||| || || ||||| || ||| Sbjct 110318 TGGCCTCCACGAAGGCGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCG 110377 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 |||| |||| ||| || ||||| || || ||| |||| || || ||||| || || Sbjct 110378 CTCAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGG 110437 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| ||| || || || | | || | | ||||| ||||| Sbjct 110438 GGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATCGAGTCGGACGGCTCG 110497 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || | || | |||||||||||| | ||| || ||||| |||||||| Sbjct 110498 ACGTCGAGCGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCAT 110547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496045013150400