Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq400 338 2e-87 >seq400 Length=224259 Score = 338 bits (374), Expect = 2e-87 Identities = 1122/1727 (65%), Gaps = 36/1727 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 |||||||||||||||||| | |||||||||||| | |||||||| ||| |||| Sbjct 135690 GAACGCCCGCAGCATATGATCATGCGTGTTGCTGTCGGTATCCACAAGGAGGACATTGAG 135749 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA-TTCACGCACGCCACGCCAAC 363566 || ||| | | || || || | ||| | |||| ||||||||||| ||||| || Sbjct 135750 GCGGCGCTCAACACGTACGAGTACATGAGT-CAGTTGTACTTCACGCACGCGACGCCTAC 135808 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 | | ||| || || || | | ||||||| | || || ||||| ||||| ||| Sbjct 135809 TCTCTTCAACGCCGGTACGCCTCGTCCACAGCTCTCGTCGTGCTTCCTTCTCGCCATGCG 135868 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 ||||| || || ||||| || | || || || ||| | || || ||||||||| Sbjct 135869 CGACGACTCAATTGAGGGCATTTACGATACGCTGAAGCAGTGCGCCTGCATTTCCAAGTG 135928 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGG 363746 || || || |||||||| || ||||| ||||| | ||||| |||||||| || Sbjct 135929 GGCCGGTGGCATTGGTGTCAACATTCACAACATTCGTTCGACCAACAGCTACATTCGTGG 135988 Query 363747 CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 ||| || | ||| || || | ||||||||||||| ||||| || |||| ||| | Sbjct 135989 CACGAACGGCTCCTCTAACGGTATCATTCCCATGCTTCGCGTGTTCAACGATACAGCGCG 136048 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 ||||| ||||| || || || ||||| || || | ||||| ||||| || ||||| Sbjct 136049 TTACGTGGACCAAGGCGGTGGTAAGCGGAAGGGCTCTTTTGCCATGTACCTTGAGCCGTG 136108 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATTG- 363924 || || |||||||| ||||| ||||| ||| ||| || ||||| | | ||| || Sbjct 136109 GCACGCGGATATTTTCGAGTTCCTTGACCTCAAGAAGAACCACGGCA----ACGAACTGC 136164 Query 363925 --CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 || || || || || |||||||| | ||| | | || | || ||||||||||| | Sbjct 136165 ACCGCGCGCGCGACCTCTTCTATGCCATGTGGATCCCCGATCTGTTCATGAAGCGCGTCG 136224 Query 363983 AGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 || | | | ||| ||||||||||| ||||| || ||||| |||| | Sbjct 136225 AGTCCAACGGGGAGTGGAGCCTCTTTTGCCCGAACGAAGCCCCTGGTCTCGCCGACTGCT 136284 Query 364043 GGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGA 364102 |||| | ||| | | || || |||| ||||| || | ||||| ||||| ||| Sbjct 136285 GGGGCGCCGAGTTCGAAGCGCTGTACGCCAAGTACGAGGCAGAGGGTCGCGCTCGCAAGG 136344 Query 364103 CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACAC 364162 || || || |||| |||||||| || | ||||||||||| ||||| || || | Sbjct 136345 TCATCAAGGCCCAACAGCTGTGGTTTGCGATGCTCGATTCGCAGATCGAGACTGGCACGC 136404 Query 364163 CCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAA 364222 |||| ||| | ||||| || ||||||| |||||| ||||||||| |||||||||| | Sbjct 136405 CCTACATGCTTTACAAGGACGCGTGCAATTCCAAGTCGAACCAGCAGAACCTTGGTACGA 136464 Query 364223 TTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 | || || ||||| || ||| | || || ||||| |||||| || | Sbjct 136465 TCAAGAGCAGTAACCTTTGCTGCGAAGTCATCGAGTACACGAGCAAGGACGAGGTCGCTG 136524 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACC 364342 | || ||||| ||||| || ||||| | |||||| | || ||| || ||| Sbjct 136525 TGTGCAACCTCGCGTCCATTGCGCTCTCCAAGTTTGTTACTGACGGTGTCTTCGACTTTA 136584 Query 364343 AGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGA 364402 || | || | | || ||| | | || |||| | ||||||| || ||| | Sbjct 136585 AGAACCTCCACAAGGTCACCAAGATCGTCACCCGCAACTTGAACAAGGTGATTGACGTCA 136644 Query 364403 ATTATTATCCAATTCCTGAAGCCGAGC-GTTCTAATATGCGTCATCGCCCGATTGGTCTT 364461 | || || || | || | || || || || ||||| || ||||| | || | Sbjct 136645 ACTACTACCCGA-TCGAGGAGGCGCGCAACAGCAACATGCGCCACCGCCCCGTCGGCATC 136703 Query 364462 GGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGG-----CATTTGATTCGC 364516 ||||| ||||||||||| || | | | || |||| | || | || || |||| Sbjct 136704 GGTGTCCAGGGCCTCGCGGATGCCT---TCATCCTCATG--GGCTACCCGTTCGAGTCGC 136758 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 | || || || || | |||||||||| || || || ||| | ||| Sbjct 136759 CCGAGGCCAAGAAGCTCAACATCCAGATCTTTGAGACGATCTACCACGCCTCTATGGAGA 136818 Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636 ||||| || | || || || ||| || || ||||| || | | Sbjct 136819 CTTCGATGGAGCTCGCCAAGCAGCTCGGCCCCTACGAGACGTACTCCGGGTCGCCCGTCT 136878 Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696 | ||||| ||||||| || | ||| ||| ||||| ||| | ||| |||||| Sbjct 136879 CCCAGGGCCGCTTCCAGTACGACATGTGGGGTGTGACGCCGACTGATCTCTGGGACTGGG 136938 Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756 ||||| | | || ||||| |||||||| || | ||||| | Sbjct 136939 CGACGCTCAAGGCGCAGGTGGCTGCTCATGGCGTGCGCAACTCTCTACTGCTGGCGCCGA 136998 Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816 |||||||||| || || || ||||||||||| |||||||| | | |||| || || || Sbjct 136999 TGCCCACGGCATCGACAGCCCAGATCCTCGGCAACAACGAATCCATCGAGCCATTCACGT 137058 Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876 ||| | || || || || || ||| | || |||||| || | || || |||||||| Sbjct 137059 CCAACATGTACTCGCGGCGCGTGCTTGCGGGCGAATTTACGATCGTCAACAAGTACCTCA 137118 Query 364877 TCAAGGA--TCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934 | ||||| || || | | ||| || ||| | | | | | ||| | ||| | Sbjct 137119 TGAAGGAACTCATTTC--ACTCGGCCTCTGGAGCGCCGACGTTCGCAACCAGATCTTGCA 137176 Query 364935 CGCTAATGGTTCTGTGCAGAACAT-TCCAGGATTTCCAGAAGATC-TGAAGCCTATTTAC 364992 | | ||| ||| ||| | | ||| || ||| ||| | | ||| |||||| Sbjct 137177 TGATCGTGGCAGTGTTCAGGGCGTCGCCACGA--TCCCCAAGCGCATCAAGGACATTTAC 137234 Query 364993 AAAACCGTATGGGAAATTTCCATGC-GAA--CTCTCATTGATATGGCGGCCGATCGCGGT 365049 || || || ||||| | || || ||| | | || |||||||||| || || Sbjct 137235 AAGACGGTGTGGGAGGT---CAAGCAGAAGGTGGTGCTGGACCTGGCGGCCGACCGAGGC 137291 Query 365050 GCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAG 365109 || || ||||| ||| |||||| | ||||| ||| | | || | | |||| Sbjct 137292 GCCTTCATCTGCCAGTCGCAGTCGATGAACGTGCACATCGCCGACCCGAGCGTGAGCAAG 137351 Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||||||| ||||| || |||| |||||| |||||| ||||| || Sbjct 137352 CTTACATCGATGCACTTTTACGCGTGGAAGCGCGGTCTCAAGACCGG 137398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303302466994484