Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq400 174 1e-38 seq1567 134 1e-26 seq389 134 1e-26 seq2606 132 5e-26 seq880 129 6e-25 seq1051 125 7e-24 >seq400 Length=224259 Score = 174 bits (192), Expect = 1e-38 Identities = 867/1352 (64%), Gaps = 49/1352 (4%) Strand=Plus/Minus Query 145051 GTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGT 145110 ||||| ||||||| | ||| ||||| || | ||| || ||| | |||| ||| ||||| Sbjct 137114 GTACTTGTTGACGATCGTAAATTCGCCCGCAAGCACGCGCCGCGAGTACATGTTGGACGT 137055 Query 145111 GAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTA 145170 ||| || || | || ||||| ||||| ||||| || || |||| ||| |||||||| Sbjct 137054 GAATGGCTCGATGGATTCGTTGTTGCCGAGGATCTGGGCTGTCGATGCCGTGGGCATCGG 136995 Query 145171 CGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCA 145230 ||||| || || || ||||||| ||| || | | |||| ||||| |||| Sbjct 136994 CGCCAGCAGTAGAGAGTTGCGCACGCCATGAGCAGCCACCTGCGCCTTGAGCGTCGCCCA 136935 Query 145231 ATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGC 145290 ||||| || ||||||| |||| |||||||||||||||| || ||||| | | | Sbjct 136934 GTCCCAGAGATCAGTCGGCGTCACACCCCACATGTCGTACTGGAAGCGGCCCTGGGAGAC 136875 Query 145291 GGGGCTGCCTTGA-AAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAAC-TCG 145346 |||| || || | | ||| | || || | ||||||||||| || | | Sbjct 136874 -GGGCGACCCGGAGTACGTCTCGTA--GGGGCCGAGCTGCTTGGCGAGCTC-CATCGAAG 136819 Query 145347 CCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCAT 145406 ||||| || | || || || ||||| || || |||||||| | | || || Sbjct 136818 TCTCCATAGAGGCGTGGTAGATCGTCTCAAAGATCTGGATGTTGAGCTTCTTGGCCTCGG 136759 Query 145407 CGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGC 145466 |||| |||| || || || | || ||||| ||||| ||||| | || | || Sbjct 136758 GCGACTCGAACGGGTAGCCCATGAGGATGAAGGCATCCGCGAGGCCCTGGACACCGATGC 136699 Query 145467 CGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACGG 145525 ||| ||| || || ||||||||| | | |||| |||||| || || | | | || | Sbjct 136698 CGACGGGGCGGTGGCGCATGTTGCTGTTGCGCGCCTCCTCGATCGGGTAGTAGTTGAC-G 136640 Query 145526 TCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAG 145585 || || | || |||||||| || || | ||| || | | | | || | |||| Sbjct 136639 TCAATCACCTTGTTCAAGTTGCGGGTGACGATCTTGGTGACCTTGTGGAGGTTCTTAAAG 136580 Query 145586 TCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAA 145645 || || || | ||||| ||| | | || || || ||||| | || || Sbjct 136579 TCGAA--GA-CACCGTCA---GTAACAAACTTGGAGAGCGCAATGGACGCGAGGTTGCAC 136526 Query 145646 ACTGCCGTCTCCTCGGCG-TCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTT 145704 || || ||| || | ||| |||| | | || ||| ||| | || || | || Sbjct 136525 ACAGCGACCTCGTCCTTGCTCG-TGTACTCGATGACTTCGCAGCAAAGGTTACTGCTCTT 136467 Query 145705 GATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTA 145764 ||| || || || || ||||| || || ||||||||||||||||| |||||||| Sbjct 136466 GATCGTACCAAGGTTCTGCTGGTTCGACTTGGAATTGCACGCGTCCTTGTAAAGCATGTA 136407 Query 145765 CGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAAC----GGTGCAAGTCCTGCGC 145818 || ||||||||| | ||||| || | || |||| | || | ||| Sbjct 136406 GGGCGTGCCAGTCTCGATCTGCGAATCGAGCATCGCAAACCACAGCTGTTGGGCCT--TG 136349 Query 145819 ACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGC 145878 | | |||| ||| | ||| |||||| | ||||| || ||| ||| | || ||| | Sbjct 136348 ATG-ACCT--TGC-GAGCGCGACCCTCTGCCTCGTACTTGGCGTACAGCGCTTCGAACTC 136293 Query 145879 GGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCC 145938 || || |||| |||| || || || | ||| || || | || ||| | || Sbjct 136292 GGCGCCCCAGCAGTCGGCGAGACCAGGGGCTTCGTTCGGGCAAAAGAGGCTCCACTCCCC 136233 Query 145939 GTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGT--CG 145996 ||||| | |||||||| ||| |||| ||| || | ||||| || || | | || || Sbjct 136232 GTTGGACTCGACGCGCTTCATGAACAGATCGGGGATCCACATGGCATAGAAGAGGTCGCG 136173 Query 145997 CGCGCTTTGCAATCCTCAGCACCCATGTTTC-GCTTCAAATTAAGCACACT-ATAGATGT 146054 ||||| |||| | | | || || ||| ||| | | ||| | ||| | || | Sbjct 136172 CGCGCGGTGCAGTTC---GTTGCCGTGGTTCTTCTTGAGGTCAAGGA-ACTCGAAAATAT 136117 Query 146055 CCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTGCCA---CCCTGGT 146111 ||||||||||||| |||| || | ||| | | || || || || ||| || |||| Sbjct 136116 CCGCGTGCCACGGCTCAAGGTACATGGCAAAAGAGCCCTTCCGCTTACCACCGCCTTGGT 136057 Query 146112 CCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGC 146171 |||||| ||| | | | ||| || ||||| | |||||| || ||| | | || Sbjct 136056 CCACGTAACGCGCTGTATCGTTGAACACGCGAAGCATGGGAATGATACCGTTAGAGGAGC 135997 Query 146172 CGTTCGT----AGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCG 146227 ||||||| || | || | || | || || | | |||| || || || Sbjct 135996 CGTTCGTGCCACGAATGTA----GCTGTTGGTCGAACGAATGTTGTGAATGTTGACACCA 135941 Query 146228 AGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCA 146287 | || ||| | ||||||| || |||||| | ||||| ||||| ||||| ||| Sbjct 135940 ATGCCACCGGCCCACTTGGAAATGCAGGCGCACTGCTTCAGCGTATCGTAAATGCCCTCA 135881 Query 146288 ATGCTATCGCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCC 146347 || ||| || ||| |||| || |||||||| | | ||| | ||||| || Sbjct 135880 ATTGAGTCGTCGCGCATGGCGAGAAGGAAGCACGACGAGAGCTGTGGACGAGGCGTACCG 135821 Query 146348 GCCGAGAACAACGTCGGGCTCGCGTGCGTAAA 146379 || ||| | || || |||||||||| || Sbjct 135820 GCGTTGAAGAGAGTAGGCGTCGCGTGCGTGAA 135789 >seq1567 Length=70164 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| ||||||| ||||| ||||| ||||||||||| Sbjct 49830 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCG 49889 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | |||||||| ||||| ||||| || || ||||| ||| ||||||||| Sbjct 49890 GCGAAGATGAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTG 49949 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | | || | || ||| | ||||| || | ||| || || || | ||| Sbjct 49950 ACGTTGTCGATCGAGTCCGAGGGCTCAACGTCGAGCGTGATGGTCTTGCCAGTCAAAGTC 50009 Query 131218 TTTACGAAAATCTGCAT 131234 || |||||||||||||| Sbjct 50010 TTGACGAAAATCTGCAT 50026 >seq389 Length=167588 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||| || | || | ||||||||||| || |||||||| ||||| Sbjct 110320 GCCTCCACGAAGGCGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 110379 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| ||||||||||| || |||| | |||||||||||||| || Sbjct 110380 CAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGG 110439 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| |||||||||| | || | | |||| | ||||| Sbjct 110440 AATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATCGAGTCGGACGGCTCGAC 110499 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||||| || | || || ||||| || || || ||||| || |||||| Sbjct 110500 GTCGAGCGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCATG 110548 >seq2606 Length=15791 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | ||||||||||| || |||||||| || Sbjct 3596 CCACCACGCAGGCGAAGGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAA 3537 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||| ||||| ||| Sbjct 3536 AGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGGG 3477 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| |||||||||| | || | | || | | ||||| | Sbjct 3476 ATGCCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCGACG 3417 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | ||| ||||| || | ||| || ||||| ||||||||| Sbjct 3416 TCGAGCGTGATGGTCTTACCCGTCAAAGTCTTGACGAAGATCTGCATG 3369 >seq880 Length=46309 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||||||||||| || |||||||| || Sbjct 27008 CCACCACGCAGGCGGAGCACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 27067 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||| ||||| ||| Sbjct 27068 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGGG 27127 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| |||||||||| | || | | || | || ||| | | Sbjct 27128 ATACCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATCGAGTCCGAGGGCTCCACG 27187 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 |||| || | ||| || || || | || || ||||| |||||||||| Sbjct 27188 TCGAGCGTGATGGTCTTGCCCGTCAAGGTCTTGACGAAGATCTGCATGA 27236 >seq1051 Length=134064 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| || ||||| | || | ||||||||||| || |||||||| || Sbjct 119957 GCCACCGCGCAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 119898 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| ||| |||| | |||||||| ||||| || Sbjct 119897 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGG 119838 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| |||||||| | | || | | || | | ||||| Sbjct 119837 AATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCAATGGAGTCCGACGGCTCGAC 119778 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || || || || ||||| || |||||| Sbjct 119777 ATCGAGGGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATTTGCATG 119729 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | || ||||| | || | ||||||||||| || |||||||| || Sbjct 120185 GCCGCCACGGAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 120126 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| ||| |||| | |||||||| ||||| || Sbjct 120125 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGG 120066 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| |||||||| | | || | | || | | ||||| Sbjct 120065 AATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCAATGGAGTCCGACGGCTCGAC 120006 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || || || || ||||| ||||||||| Sbjct 120005 ATCGAGGGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCATG 119957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471994733710080