Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1567 96.9 3e-15 >seq1567 Length=70164 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||||||| || || ||| || || || || || Sbjct 49829 CGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCC 49888 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| ||||||| ||||| || ||||| || ||||| || ||||| ||||| || || Sbjct 49889 GGCGAAGATGAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 49948 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | | ||| | || || ||||| | || | || ||||| |||| ||| Sbjct 49949 GACGTTGTCGATCGAGTCCGAGGGCTCAACGTCGAGCGTGATGGTCTTGCCAGTCAAAGT 50008 Query 114365 TTTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 50009 CTTGACGAAAATCTGCAT 50026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420118721371944