Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq400 239 5e-58 seq2528 152 6e-32 seq2543 107 2e-18 >seq400 Length=224259 Score = 239 bits (264), Expect = 5e-58 Identities = 991/1535 (65%), Gaps = 65/1535 (4%) Strand=Plus/Minus Query 113880 TGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 113939 |||| |||| || ||| | ||| ||||| | ||| || ||||| || ||| | | Sbjct 137130 TGAGTTCCTTCATGAGGTACTTGTTGACGATCGTAAATTCGCCCGCAAGCACGCGCCGCG 137071 Query 113940 GATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGG 113999 || || |||| |||| ||||||| | | | || ||||| || | ||| ||||| || | Sbjct 137070 AGTACATGTTGGACGTGAATGGCTCGATGGATTCGTTGTTGCCGAGGATCTGGGCTGTCG 137011 Query 114000 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTC--CCTAATGCG 114057 | || |||||||| || |||| || || ||| || | || | | || |||| Sbjct 137010 ATGCCGTGGGCATCGGCGCCAGCAGTAGAGAGTTGCGCACGCCATGAGCAGCCACCTGCG 136951 Query 114058 TTCCTTGAGGGCGTCCCAGTCGTAGT--TGAG-CTTTGTCTCCCCCTGCCACATATCAAA 114114 ||||||| | ||||||| || | || | ||| | ||| ||||| || | Sbjct 136950 --CCTTGAGCGTCGCCCAGTCCCAGAGATCAGTCGGCGTCACACCC---CACATGTCGTA 136896 Query 114115 CTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTC 114174 ||||| | || |||||| | ||||| || | |||||||| ||||| | || Sbjct 136895 CTGGAAGCGGCCCTGGGAGACGGGCGACCCGGAGTACGTCTCGTAGGGGCCG---AGCTG 136839 Query 114175 CGCCAATTCG-GAGCTCGCCTCGAGGGCT--------GCGTGATACATTGTCTCAAAAAT 114225 | || | |||||| | |||| | || ||||| || || |||||||| || Sbjct 136838 C-----TTGGCGAGCTC-CATCGAAGTCTCCATAGAGGCGTGGTAGATCGTCTCAAAGAT 136785 Query 114226 GCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG-AGTCGGCACAAA-ATAAAT 114283 | || | |||||||||| || || |||| | || | || | || || Sbjct 136784 CTGGATGTTGAGCTTCTTGGCCTCGGGCGACTCGAACGGGTAGCC--CATGAGGATGAAG 136727 Query 114284 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGA 114343 |||||||||| || |||||||||| ||| | ||||| || | ||| || || || Sbjct 136726 GCATCCGCGAGGCCCTGGACACCGATGCCGACGGGGCGGTGGCGCATGTTGCTGTTGCGC 136667 Query 114344 GCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 114403 || ||| | || || | || || || ||| | || | || |||||| | | Sbjct 136666 GCCTCCTCGATCGGGTAGTAGTTGACGTCAATCACCTTGTTCAAGTTGCGGGTGACGATC 136607 Query 114404 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 114463 || |||| | || || || | | || || || | | ||| | ||| |||| Sbjct 136606 TTGGTGACCTTGTGGAGGTTCTTAAAGTCGAA-----GACAC-CGTCAGTAACAAACTTG 136553 Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 | || || || ||||| || || ||||||| | ||| ||||| |||||||| || Sbjct 136552 GAGAGCGCAATGGACGCGAGGTTGCACACAGCGACCTCGTCCTTGCTCGTGTACTCGATG 136493 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 | ||| || | || ||||| || || || | ||||| || || ||||| | Sbjct 136492 ACTTCGCAGCAAAGGTTACTGCTCTTGATCGTACCAAGGTTCTGCTGGTTCGACTTGGAA 136433 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || ||||| ||||||||||||||||| ||||| || ||||| | || || | ||| || Sbjct 136432 TTGCACGCGTCCTTGTAAAGCATGTAGGGCGTGCCAGTCTCGATCTGCGAATCGAGCATC 136373 Query 114644 GCCTTCCAGACATCGGCGGCTGGCACAG-TGGCGTTG---GCTCGCCCCTCCTCCTCGTA 114699 || ||| || | | | ||| | || | ||| || || ||||| ||||||| Sbjct 136372 GCAAACCA--CAGCTGTTG--GGCCTTGATGACCTTGCGAGCGCGACCCTCTGCCTCGTA 136317 Query 114700 CTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATC 114759 ||| | ||| || ||||| ||||| | ||| | || | ||| || || || | | Sbjct 136316 CTTGGCGTACAGCGCTTCGAACTCGGCGCCCCAGCAGTCGGCGAGACCAGGGGCTTCGTT 136257 Query 114760 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGAT 114819 ||||| ||||| ||| | || ||| || ||||||||||| || || ||||| Sbjct 136256 CGGGCAAAAGAGGCTCCACTCCCCGTTGGACTCGACGCGCTTCATGAACAGATCGGGGAT 136197 Query 114820 CCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTC--TTCATCCCCCTGATTGAGACGC 114877 ||| | || ||||||| || || ||| | | | ||| | || || || Sbjct 136196 CCACATGGCATAGAAGAGGTCGCGC--GCGCGGTGCAGTTCGTTGCCGTGGTTCTTCTTG 136139 Query 114878 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 114937 | || | || || | ||||||||||||||||| || ||||||| || | || ||| Sbjct 136138 AGGTCAAGGAACTCGAAAATATCCGCGTGCCACGGCTCAAGGTACATGGCAAAAGAGCCC 136079 Query 114938 TTACGACGACCA--GCCT-GGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATT 114994 || || |||| |||| ||| || || | |||||| | || || ||||||||||| Sbjct 136078 TTCCGCTTACCACCGCCTTGGTCCACGTAACGCGCTGTATCGTTGAACACGCGAAGCATG 136019 Query 114995 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGAC- 115053 ||||||||||| | ||| ||| || || || ||||| | | |||| || || Sbjct 136018 GGAATGATACCGTTAGAGGAGCCGTTCGTGCCACGAAT---GTAGCTGTTGG-TCGAACG 135963 Query 115054 ---ATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 115110 | || |||| | |||||| || || |||||||| || || ||||||| | | Sbjct 135962 AATGTTGTGAATGTTGACACCAATGCCACCGGCCCACTTGGAAATGCAGGCGCACTGCTT 135903 Query 115111 GAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGA 115170 || | |||| || || || || ||||| | | |||| ||||||||| ||| Sbjct 135902 CAGCGTATCGTAAATGCCCTCAATTGAGTCGTCGCGCATGGCGAGAAGGAAGCACGACGA 135843 Query 115171 CATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC- 115229 | ||||| | || ||||| ||||||||||| || || |||||||| |||| ||| Sbjct 135842 GAGCTGTGGACGAGGCGTACCGGCGTTGAAGAGAGTAGGCGTCGCGTGCGTGAA-GTACA 135784 Query 115230 CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGA 115289 || ||| | ||||| || | | | || |||||| ||| ||| ||||||| Sbjct 135783 ACTGACTCATGTACTCGTACGTGTTGAGCGCCGCCTCAATGTCCTCCTTGTGGATACCGA 135724 Query 115290 TCGAGACCCGCATAAACATGTATTG-GGGTGTTTCCATCAGGATACCATCGAGCCTCTGG 115348 | || ||||| | ||| | || ||| ||| || || | ||| || | | | Sbjct 135723 CAGCAACACGCATGATCATATGCTGCGGGCGTTCGCA-CACCTTGTCATTGACACGCAGA 135665 Query 115349 AGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 || || ||||| || | ||||||| ||||| || Sbjct 135664 AGATAGCTCTTTTCGAGCGTCTTGAAGCCAAAGTA 135630 >seq2528 Length=14935 Score = 152 bits (168), Expect = 6e-32 Identities = 556/855 (65%), Gaps = 24/855 (3%) Strand=Plus/Plus Query 125752 CTTGCCGTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATT 125811 |||| ||| || || || ||||||||||||||||| ||||| || | | | ||| | Sbjct 4785 CTTGGAGTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGGGAGATCAT 4844 Query 125812 CTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTG 125869 ||||| | || ||||||||||| | || | | ||| |||| || || ||| Sbjct 4845 ATCCATCCAGTCGAATGGGTTCTTGGCGTGGAAGAGCTTGGTGGCGCC--AAGGGCGTTG 4902 Query 125870 AGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATG 125929 || || || || | | | | || ||||| | |||| | |||||||| |||||| Sbjct 4903 AGAAGGCGGTCGGCGCAGAATTCGATGTATTGGCACATGAGCGTCGAGTTCATGCCGATG 4962 Query 125930 AGGTT-ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 || | ||| ||||||| || | | |||| |||||| || || ||||| || | | Sbjct 4963 AGTTCGACA-GGGAGCGATTCGGAAACGAACTGCTTCTCGATCTCGACGGCGTCACCGAT 5021 Query 125989 GATGGCGTGAATGGTGTCC----ACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCA 126044 ||| | || ||| || | | || || | || | | | ||| || Sbjct 5022 GATCTCATGGATGCGCTCGTTTGAGAGCTTGTTGAT-GAGCTTCGAGTACATGAGG--CA 5078 Query 126045 CGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTC 126104 ||| || || ||| || || ||||| || |||||||| |||||||| |||| || | Sbjct 5079 -GGCGAAGTCGCAGTGAAGGCCTTCGTCGCGCGAGATGAGCTCATTCGAAAAGCTCAAGC 5137 Query 126105 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGA 126164 | ||||||||||| |||||||| | |||||| || | || || || || |||||||| | Sbjct 5138 CCGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCAGAGAAGAAAA 5197 Query 126165 TTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTG-TGTC 126222 | || || ||| ||||| |||| || || || || ||| | |||| || | ||| Sbjct 5198 TGCCTTCGACAGCAGCGAAGGCAACGATGCGTTCGGCGTAAGCA--GCGATTTGGTTGTT 5255 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC--- 126279 ||||||| | ||||||||| ||||| || || |||||||| || | ||| || Sbjct 5256 GCACCACTTGAGCGCCCACTGGGCCTTGCGCTGGACACACGGGATCGTGTCGATGGCGCG 5315 Query 126280 TTCAAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 126339 | | | ||||||| | | || || ||||||||| | || || ||| || || Sbjct 5316 GAGCACGCGGTCCTTCTCAACCG-TG--TCCTTGATGTACGTGTCAATAAGTAGCGAGTA 5372 Query 126340 TGTTTCGCCGTGGACCATTTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399 |||| ||||| ||||| || | |||| | | ||||| | || ||||| Sbjct 5373 GACTTCGGAGTGGATGTTTTCAATAGCGATCTGAAAGCCATAGAAGCAACGAGCTTCAGG 5432 Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 | ||| || || | || || || | | |||||| ||||| || || ||| | Sbjct 5433 CACCTGAACTTCGTTGGAGAAGTTCATGGCCAAGTTCTCATTTACAATGCCGTCAGACGC 5492 Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCA 126519 || || ||||| || | | | | ||||| | || || || | || ||| ||| Sbjct 5493 GGCGAAGAACGCAAGCACGTGCGTGATGAAGAAGCGCTCGTTGTCCGTGAGCTTCTCCCA 5552 Query 126520 GTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAATTGCTCATTTGAGCCTT 126579 ||| | ||||| | |||||| | || || || ||||| |||| | ||||| Sbjct 5553 GTCCTTCAGATCGTGGACGAGATCGAGTTCTTCGGCTGTCCAGAAGCTCGCCTCGGCCTT 5612 Query 126580 CTTATAGAGTTCCCA 126594 ||| || | |||||| Sbjct 5613 CTTGTACATTTCCCA 5627 >seq2543 Length=13544 Score = 107 bits (118), Expect = 2e-18 Identities = 282/424 (67%), Gaps = 10/424 (2%) Strand=Plus/Minus Query 171728 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 171787 || |||||||| ||||||||||||||||| || | ||| || || | |||| ||| | Sbjct 4994 CCCGTGCCAATGCCTTCGGTGCCGTTCACAAGCAGCATGGGCAGGATGGGCACGTAGTAC 4935 Query 171788 TCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTC--CCTCG 171845 ||| || | | | || || || | | || | |||| || ||||| ||||| Sbjct 4934 GTTGGCTCGACGGGCTGGCCGTCGTCGTGGACGTACTGCAGCAGCGGTTCGTCGGCCTCG 4875 Query 171846 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCG--TTTGAGA 171903 | | | || | | |||| || | ||||||||||||| || ||| | Sbjct 4874 GGGTACACCAGGCGCGTGTA--CTTGTGCAGGTGCGTGAAGATGTACCGCGGACTTGCG- 4818 Query 171904 CGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGAT 171963 || |||||||| ||| || ||||| ||||| || || |||| | | ||| || Sbjct 4817 -GCGTCTTTGCCGCCCTGTAGTCGCGTACCAAACTGCCCCGACGGGTACAAGAGCGGGAG 4759 Query 171964 ATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACTT 172022 ||||| | || | |||||| | ||||| ||||| || || | || | || ||| Sbjct 4758 GTTGTTGGCGCCAACGTAGTCTTGGGCCATGTTGACGATTGTGCTGTGC-AACGACGCTT 4700 Query 172023 CACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATCT 172082 ||||||| ||||| |||| | || ||| || |||| | ||| ||||| || | || Sbjct 4699 CACCGTGGTGGTACGCCGTATGCTCGGCGCAGTAGCCCGCGAGCTGCGCCACTTTGACCT 4640 Query 172083 CATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGC 172142 | | | |||| ||| | |||||||||| | | || || ||||| || |||||||| | Sbjct 4639 CCTTCGTGAGCTTCCGTTTGAAGCACGCAAAGAGCACTTTCCTCTGGGACGGCTTGAGTC 4580 Query 172143 CGTC 172146 |||| Sbjct 4579 CGTC 4576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597330736290960