Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq400 280 1e-70 >seq400 Length=224259 Score = 280 bits (310), Expect = 1e-70 Identities = 986/1533 (64%), Gaps = 30/1533 (2%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 || || || || || |||||||| || || || |||||| | || ||||| ||||| Sbjct 135798 GCGACGCCTACTCTCTTCAACGCCGGTACGCCTCGTCCACAGCTCTCGTCGTGCTTCCTT 135857 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | | |||||| || || |||| ||| | || ||| | || || | Sbjct 135858 CTCGCCATGCGCGACGACTCAATTGAGGGCATTTACGATACGCTGAAGCAGTGCGCCTGC 135917 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || || || | || || || || || ||| | ||| || | ||| | | | Sbjct 135918 ATTTCCAAGTGGGCCGGTGGCATTGGTGTCAACATTCACAACATTCGTTCGACCAACAGC 135977 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| || || || || ||| |||| ||||| || | || ||||| || || |||||| Sbjct 135978 TACATTCGTGGCACGAACGGCTCCTCTAACGGTATCATTCCCATGCTTCGCGTGTTCAAC 136037 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | | ||||| ||||||||||| || ||||| | | ||||||| ||||| || | || Sbjct 136038 GATACAGCGCGTTACGTGGACCAAGGCGGTGGTAAGCGGAAGGGCTCTTTTGCCATGTAC 136097 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || ||||| ||||||||||| | | ||| | ||||| ||||||||||||||| Sbjct 136098 CTTGAGCCGTGGCACGCGGATATTTTCGAGTTCCTTGACCTCAAGAAGAACCACGGCAAC 136157 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || ||| | | || | ||||||||||| || | ||| | || || || || ||||| Sbjct 136158 GAACTGCACCGCGCGCGCGACCTCTTCTATGCCATGTGGATCCCCGATCTGTTCATGAAG 136217 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 ||||||||| ||| | ||||| || ||||| || || ||| || || || || Sbjct 136218 CGCGTCGAGTCCAACGGGGAGTGGAGCCTCTTTTGCCCGAACGAAGCCCCTGGTCTCGCC 136277 Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431 ||| || || | || |||| |||| || ||||| | |||| || Sbjct 136278 GACTGCTGGGGCGCCGAGTTCGAAGCGCTGTACGCCAAGTACGAGGCAGAGGGTCGCGCT 136337 Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491 | ||||| || | || |||||||| | ||| | || ||| | ||||| Sbjct 136338 CGCAAGGTCATCAAGGCCCAACAGCTGTGGTTTGCGATGCTCGATTCGCAGATCGAGACT 136397 Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551 || ||||||||||| | | ||||||| | ||| ||||||| ||||||||| |||| Sbjct 136398 GGCACGCCCTACATGCTTTACAAGGACGCGTGCAATTCCAAGTCGAACCAGCAGAACCTT 136457 Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611 || |||||||||| || || ||| ||| | ||||||| || ||||||| Sbjct 136458 GGTACGATCAAGAGCAGTAACCTTTGCTGCGAAGTCATCGAGTACACGAGCAAGGACGAG 136517 Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACG 94671 | |||||||| ||||| | ||||| || |||| || || ||| Sbjct 136518 GTCGCTGTGTGCAACCTCGCGTCCATTGCGCTCTCCAAGTTTGT----------TAC--- 136564 Query 94672 TCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT---CTTG 94728 || | || ||||| | || | || || || | | ||| || | Sbjct 136565 -TGACGGTGTC-TTCGACTTTAAGAACCTCCACAAGGTCAC---CAAGATCGTCACCCGC 136619 Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAAC 94788 ||| |||||| ||| || ||| |||| |||||| || ||||||| ||| ||| Sbjct 136620 AACTTGAACAAGGTGATTGACGTCAACTACTACCCGATCGAGGAGGCGCGCAACAGCAAC 136679 Query 94789 CTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATG 94848 || || || ||| |||||||||| |||||||| ||||||| || | | | ||| Sbjct 136680 ATGCGCCACCGCCCCGTCGGCATCGGTGTCCAGGGCCTCGCGGATGCCTTCATCCTCATG 136739 Query 94849 CGTCTGCCC-TACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCAT 94907 | || ||| | ||| || ||| || | | || | | || || || | || Sbjct 136740 -GGCTACCCGTTCGAGTCGCCCGAGGCCAAGAAGCTCAACATCCAGATCTTTGAGACGAT 136798 Query 94908 TTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGA 94967 || ||| | ||| | || | | | |||| | | ||| || |||| Sbjct 136799 CTACCACGCCTCTATGGAGACTTCGATGGAGCTCGCCA---AGCAGCTCGGCCCCTACGA 136855 Query 94968 ATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027 ||| | ||| |||||| | |||||| || |||| |||| | |||||||||| Sbjct 136856 GACGTACTCCGGGTCGCCCGTCTCCCAGGGCCGCTTCCAGTACGACATGTGGGGTGTGAC 136915 Query 95028 GCCCTCGGGTCTGTACGACTGG--GAAGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085 ||| | | ||| | |||||| || |||| | |||| | || | || || ||| Sbjct 136916 GCCGACTGATCTCTGGGACTGGGCGACGCTCAAGGCGCAGGTGGCTGC--TCATGGCGTG 136973 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 ||| | || || |||| || ||||||||||| || || || |||||||| |||||| Sbjct 136974 CGCAACTCTCTACTGCTGGCGCCGATGCCCACGGCATCGACAGCCCAGATCCTCGGCAAC 137033 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||| || |||| || ||||| |||||| ||||| |||| ||||| || || ||| Sbjct 137034 AACGAATCCATCGAGCCATTCACGTCCAACATGTACTCGCGGCGCGTGCTTGCGGGCGAA 137093 Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGAC 95265 || | || |||||||| ||||| | ||| || | || || || | ||| | | | Sbjct 137094 TTTACGATCGTCAACAAGTACCTCATGAAGGAACTCATTTCACTCGGCCTCTGGAGCGCC 137153 Query 95266 AAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCG 95325 | || ||||| | | | | ||| || ||| | || | || || Sbjct 137154 GACGTTCGCAACCAGATCTTGCATGATCGTGGCAGTGTTCAGGGCGTCGCCACGATCCCC 137213 Query 95326 GAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGAC 95385 || |||||||| | |||||||| ||||||||| || |||| ||| | || ||| Sbjct 137214 AAGCGCATCAAGGACATTTACAAGACGGTGTGGGAGGTCAAGCAGAAGGTGGTGCTGGAC 137273 Query 95386 CACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 | ||||||| ||| || |||||||||||||| Sbjct 137274 CTGGCGGCCGACCGAGGCGCCTTCATCTGCCAG 137306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494704264469520