Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq400 152 5e-32 seq389 111 2e-19 seq1567 102 8e-17 seq1051 86.0 6e-12 seq880 86.0 6e-12 seq2606 84.2 2e-11 >seq400 Length=224259 Score = 152 bits (168), Expect = 5e-32 Identities = 974/1548 (63%), Gaps = 57/1548 (4%) Strand=Plus/Minus Query 153005 AATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCT 153064 |||||| || | || | ||||| |||||| | ||| |||||||| | ||| || | Sbjct 137132 AATGAGTTCCTTCATGAGGTACTTGTTGACGATCGTAAATTCGCCCGCAAGCACGCGCCG 137073 Query 153065 CAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGT 153124 | | || | ||| ||||| || || | ||||||||| ||||| || || || || || Sbjct 137072 CGAGTACATGTTGGACGTGAATGGCTCGATGGATTCGTTGTTGCCGAGGATCTGGGCTGT 137013 Query 153125 GGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTC 153184 | ||| || ||||| ||||| || | ||| || |||| ||| || || | | Sbjct 137012 CGATGCCGTGGGCATCGGCGCCAGCAGTAGAGAGTTGCGCACGCCATGAGCAGCCACCTG 136953 Query 153185 GTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTG 153244 |||| | || | ||| ||||| || | | ||| ||| | ||||||||||||||| Sbjct 136952 CGCCTTGAGCGTCGCCCAGTCCCAGAGATCAGTCGGCGTCACACCCCACATGTCGTACTG 136893 Query 153245 TAA----CACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTT 153300 || | || ||| ||| ||| |||| |||| |||| |||| | | Sbjct 136892 GAAGCGGCCCTGGGAGACGGGC--GAC--CCGGAGTACGTCTCGTAGGGGCCGAGCTGCT 136837 Query 153301 GGGCCAGTTCGCAGC-TAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTA 153359 ||| || || || | || ||| | | | | | ||| || || || ||| || | Sbjct 136836 TGGCGAGCTC-CATCGAAGTCTCCATAGAGGCGTGGTAGATCGTCTCAAAGATCTGGATG 136778 Query 153360 TTGAGAACGGCCGCTTCTTCGC--------TCTCGTACGGCATGCGCAGCAGCACAAAGG 153411 |||| ||||||| || |||| |||| || || || | |||| Sbjct 136777 TTGA--------GCTTCTTGGCCTCGGGCGACTCGAACGGGTAGCCCATGAGGATGAAGG 136726 Query 153412 CGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCG 153471 | || || || ||||||| ||||| ||||| ||| || || | ||||||| | || Sbjct 136725 CATCCGCGAGGCCCTGGACACCGATGCCGACGGGGCGGTGGCGCATGTTGCTGTTGCGCG 136666 Query 153472 CGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTT 153531 | | | || || |||| ||| || || | ||||| | |||||| || | | Sbjct 136665 CCTCCTCGATCGGGTAGTAGTTGACGTCAATCACCTTGTTCAAGTTGCGGGTGACGATCT 136606 Query 153532 TAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGAT 153591 | || | | | || |||| || || || | |||| | | | | || Sbjct 136605 TGGTGACCTTGTGGAGGTTCTTAAAGTCGAAG---ACACCGTC-AGTAACAAACTTGGA- 136551 Query 153592 TCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCG-TCGCTGTACTGCACG 153650 | ||||| ||||| || || || || || ||| || | ||| |||||| | | Sbjct 136550 -GAGCGCAATGGACGCGAGGTTGCACACAGCGACCTCGTCCTTGCTCG-TGTACTCGATG 136493 Query 153651 ATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGA 153710 | ||| ||| ||||| |||| || || || | || ||||| || ||| | Sbjct 136492 ACTTCGCAGCAAAGGTTACTGCTCTTGATCGTACCAAGGTTCTGCTGGTTCGACTTGGAA 136433 Query 153711 TTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT- 153769 ||||||||||| ||| | |||||||| || ||| ||||||| |||| |||| || Sbjct 136432 TTGCACGCGTCCTTGTAAAGCATGTAGGGCGTGCCAGTCTCGATCTGCGAATCGAGCATC 136373 Query 153770 --AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTAT 153827 ||||| ||| | || || | || ||| ||| ||||| |||||| Sbjct 136372 GCAAACC---ACAGCTGTTGGGCCTTGATGACCTTGCGAGCGCGACCCTCTGCCTCGTAC 136316 Query 153828 CGCTCGTACAGTCGC-TCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATG 153886 ||||||| ||| || |||||| |||| ||||||||||||| || || | | Sbjct 136315 TTGGCGTACAG-CGCTTCGAACTCGGCGCCCCAGCAGTCGGCGAGACCAGGGGCTTCGTT 136257 Query 153887 CGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCAC 153946 ||| || | || |||| ||| || | |||||| |||||||||||| || | Sbjct 136256 CGGGCAAAAGAGGCTCCACTCCCCGTTGGACTCGACGCGCTTCATGAACAGATCGGGGAT 136197 Query 153947 CCAGAGCGCGTACATGAGGT--CGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTC 154004 ||| | || || | ||||| ||||||| |||| | || ||| ||| || Sbjct 136196 CCACATGGCATAGAAGAGGTCGCGCGCGCGGTGCAGT--TCGTTGCCGTGGTTCTTCTTG 136139 Query 154005 AGATTGA-GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC 154063 || | | | || | | | || || |||||||| || |||| ||| | ||| | | || Sbjct 136138 AGGTCAAGGAACTCGA-AAATATCCGCGTGCCACGGCTCAAGGTACATGGCAAAAGAGCC 136080 Query 154064 TTTACGCTT---TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCAT 154120 || ||||| ||||| || || |||| ||| | ||| |||||| ||||| | ||| Sbjct 136079 CTTCCGCTTACCACCGCCTTGGTCCACGTAACGCGCTGTATCGTTGAACACGCGAAGCAT 136020 Query 154121 GGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCAC 154180 ||| | ||| | | || |||||| || | || | |||| | | || | Sbjct 136019 GGGAATGATACCGTTAGAGGAGCCGTTCGTGCCACGAATGTAGCTGTTGGTCGAACGAAT 135960 Query 154181 TTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAG 154240 | || | ||| || |||||||| ||| | |||| || ||| ||||| | ||| Sbjct 135959 GTTGTGAATGTTGACACCAATGCCACCGGCCCACTTGGAAATGCAGGCGCACTGCTTCAG 135900 Query 154241 CGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACAT 154300 ||| ||| ||||| || || |||||||| | | |||| | ||| ||||| | | Sbjct 135899 CGTATCGTAAATGCCCTCAATTGAGTCGTCGCGCATGGCGAGAAGGAAGCACGACGAGAG 135840 Query 154301 TTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTG 154360 || ||| |||| || || ||||| || || |||||||||| || || Sbjct 135839 CTGTGGACGAGGCGTACCGGCGTTGAAGAGAGTAGGCGTCGCGTGCGTGAAGTACAACTG 135780 Query 154361 GCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGC 154420 ||||| |||||| | || || | || || || || ||| || |||| || Sbjct 135779 ACTCATGTACTCGTACGTGTTGAGCGCCGCCTCAATGTCCTCCTTGTGGATACCGACAGC 135720 Query 154421 GACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCA---ATCTTCAAGAG 154477 || ||||||| ||| |||||||| |||||| || |||||| | || || Sbjct 135719 AACACGCATGATCATATGCTGCGGGCGTTCGCACAC---CTTGTCATTGACACGCAGAAG 135663 Query 154478 ATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATC 154525 ||| | |||||||| || ||| | || || || | ||| ||||| || Sbjct 135662 ATAGCTCTTTTCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCAAAGTC 135615 >seq389 Length=167588 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||| || || || |||| | Sbjct 110354 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCA 110413 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || || | Sbjct 110414 AAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACG 110473 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | | ||||| || ||| || |||| ||| | ||| || || || || || || Sbjct 110474 TTGTCAATCGAGTCGGACGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTGAGCGTCTTG 110533 Query 138601 ACAAAAATCTGCATGG 138616 || || || ||||||| Sbjct 110534 ACGAAGATTTGCATGG 110549 >seq1567 Length=70164 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| || || |||| Sbjct 49833 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 49892 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| || ||||| || || || || ||||| ||| || || || | Sbjct 49893 AAGATGAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACG 49952 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | | ||| | | ||| || |||| ||| | || || ||||||| ||| || Sbjct 49953 TTGTCGATCGAGTCCGAGGGCTCAACGTCGAGCGTGATGGTCTTGCCAGTCAAAGTCTTG 50012 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 50013 ACGAAAATCTGCAT 50026 >seq1051 Length=134064 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || || |||| Sbjct 120151 GACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 120092 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| || ||||| || || || || ||||| ||| || || || | Sbjct 120091 AAGATGAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACG 120032 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | || ||| | || ||| || |||| || | || || || ||||| || || Sbjct 120031 TTGTCAATGGAGTCCGACGGCTCGACATCGAGGGTGATGGTCTTGCCCGTCAGCGTCTTG 119972 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 119971 ACGAAGATCTGCATG 119957 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || || |||| Sbjct 119923 GACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 119864 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| || ||||| || || || || ||||| ||| || || || | Sbjct 119863 AAGATGAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACG 119804 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | || ||| | || ||| || |||| || | || || || ||||| || || Sbjct 119803 TTGTCAATGGAGTCCGACGGCTCGACATCGAGGGTGATGGTCTTGCCCGTCAGCGTCTTG 119744 Query 138601 ACAAAAATCTGCATGGCTT 138619 || || || ||||||| || Sbjct 119743 ACGAAGATTTGCATGGTTT 119725 >seq880 Length=46309 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || || |||| Sbjct 27041 GACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCG 27100 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| || ||||| || ||||| || ||||| ||| || || || | Sbjct 27101 AAGATGAGGCGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTCTGCTTGACG 27160 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | | ||| | | |||||| |||| ||| | || || || |||| || || Sbjct 27161 TTGTCAATCGAGTCCGAGGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAAGGTCTTG 27220 Query 138601 ACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 27221 ACGAAGATCTGCATG 27235 >seq2606 Length=15791 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || |||||| || || || |||| Sbjct 3563 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCCTCAAGCTGCTTGCCGGCG 3504 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| || ||||| || || || || ||||| ||| || || || | Sbjct 3503 AAGATGAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACG 3444 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | | ||| | | ||| || |||| ||| | || ||||| |||| ||| || Sbjct 3443 TTGTCGATCGAGTCCGAAGGCTCGACGTCGAGCGTGATGGTCTTACCCGTCAAAGTCTTG 3384 Query 138601 ACAAAAATCTGCATGG 138616 || || |||||||||| Sbjct 3383 ACGAAGATCTGCATGG 3368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496243405556640