Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq389 100 3e-16 >seq389 Length=167588 Score = 100 bits (110), Expect = 3e-16 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 45108 TTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTAT 45165 |||||| ||||| || || | || || || || ||||| || ||||| ||||| || | Sbjct 110313 TTTATTGGCCTCCACGAAGGCGCAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGT 110372 Query 45166 AATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGT 45225 | ||||| | || || || | || || || || | || | || ||||||| Sbjct 110373 AGTCGCTCAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGT 110432 Query 45226 CCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAA 45284 |||| |||||||| || || || || || || || |||| || | || | | |||||| Sbjct 110433 CCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGA-CGTTGTCAATCGAGTCGGAC 110491 Query 45285 GACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | |||||| ||||| || | ||| |||||||| || || || || || |||||||| Sbjct 110492 GGCTCGACGTCGAGCGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATTTGCAT 110547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451985899577520