Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq400 134 2e-26 >seq400 Length=224259 Score = 134 bits (148), Expect = 2e-26 Identities = 430/647 (66%), Gaps = 24/647 (4%) Strand=Plus/Minus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || ||||||||||||||||| || || || |||| |||| | |||||| || | || Sbjct 137410 AGGTAGTACATGCCGGTCTTGAGACCGCGCTTCCACGCGTAAAAGTGCATCGATGTAAGC 137351 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 ||||||||| | |||||||| ||||| | ||||| ||||| ||| |||| ||||| Sbjct 137350 TTGCTCACGCTCGGGTCGGCGATGTGCACGTTCATCGACTGCGACTGGCAGATG-AAGGC 137292 Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063 ||| || || || |||| | | | ||||||| | |||||||||||||||| | Sbjct 137291 GCCTCGGTCGGCCGCCAGGTCCAGCACCACCTTCTGCTTGACCTCCCACACCGTCTTGTA 137232 Query 204064 CACGTCTCTGGTGTG-TTGAGGCACATC-TTCCCACGTCCTGATC-GAGCCGTTGTCGGC 204120 | ||| || || | ||| || ||| | | ||| ||||| | ||| || Sbjct 137231 AATGTCCTTGATGCGCTTGGGG---ATCGTGGCGACGCCCTGAACACTGCCACGATCATG 137175 Query 204121 CATCAGTCT-CATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCA 204179 || | ||| | | || | | ||| | ||| | || || ||| || | Sbjct 137174 CAAGA-TCTGGTTGCGAACGTCGGCGCTCCAGAGGCCGAGTGAAATGAGTTCCTTCATGA 137116 Query 204180 GGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGG 204239 ||| ||||| |||| ||| || || | ||||| | || | | ||| |||| | Sbjct 137115 GGTACTTGTTGACGATCGTAAATTCGCCCGCAAGCACGCGCCGCGAGTACATGTTGGACG 137056 Query 204240 TGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGG 204299 ||||||| |||| | ||||||||||||| ||||| || || ||||||||||| | Sbjct 137055 TGAATGGCTCGATGGATTCGTTGTTGCCGAGGATCTGGGCTGTCGATGCCGTGGGCATCG 136996 Query 204300 GAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGAC-CCTGCG-CTTCAGAGAGGT 204357 | ||||| || || ||||||||||| || || | | |||||| ||| || | | Sbjct 136995 GCGCCAGCAGTAGAGAGTTGCGCACGCC--ATGAGCAGCCACCTGCGCCTTGAGCGTCGC 136938 Query 204358 CCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACT 204417 |||||| | || | || |||| |||||||||||| |||| ||| ||| || Sbjct 136937 CCAGTCCCAGAGATCAGTCGGCGTCACACCCCACATGTCGTACTGGAAGCGGCCCTGGGA 136878 Query 204418 GACTGGGCTGCCC-TTGTACGTCGGATA-AGGCTGATCCTCTTCTGCCAGCTTGCACGAG 204475 ||| |||| ||| ||||||| || ||| || | ||| || |||| ||| Sbjct 136877 GAC-GGGCGACCCGGAGTACGTCTCGTAGGGGCCGAGCTGCTT-GGCGAGCTCCATCGAA 136820 Query 204476 GCGGCCAT---GGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 | |||| |||||| ||| || |||||||||||||| | ||| Sbjct 136819 GTCTCCATAGAGGCGTG---GTAGATCGTCTCAAAGATCTGGATGTT 136776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795124765434720