Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2528 237 2e-57 seq1051 154 1e-32 seq389 152 5e-32 seq880 134 1e-26 seq2606 118 1e-21 seq1567 118 1e-21 >seq2528 Length=14935 Score = 237 bits (262), Expect = 2e-57 Identities = 421/609 (69%), Gaps = 4/609 (1%) Strand=Plus/Plus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 |||| | ||| || |||||||| || | ||| ||||| | || ||||| || || | | Sbjct 5069 ACATGAGGCAGGCGAAGTCGCAGTGAAGGCCTTCGTCGCGCGAGATGAGCTCATT-CGAA 5127 Query 132947 AAG-TCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005 ||| ||||||| |||||||| ||||| || |||||||| || |||| | ||| ||| Sbjct 5128 AAGCTCAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCA 5187 Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065 || ||||| | ||| ||||| || ||||| || || | ||| ||| || | | || | Sbjct 5188 GAGAAGAAAATGCCTTCGACAGCAGCGAAGGCAACGATGCGTTCGGCGTAAGCAGCGATT 5247 Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 | | || | ||| |||||||| | |||||| | ||| ||||| ||||| ||| Sbjct 5248 TGGTTGTTGCACCACTTGAGCGCCCACTGGGCCTTGCGCTGGACACACGGGATCGTGTCG 5307 Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTC 133185 |||||| | || ||| ||||| ||| | | ||| ||||| || || | Sbjct 5308 ATGGCGCGGAGCACGCGGTCCTTCTCAACCGTGTCCTTGATGTACGTGTCAATAAGTAGC 5367 Query 133186 GAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCC 133245 || || | ||| ||||| | ||| || || ||||| |||||||| || ||||| || || Sbjct 5368 GAGTAGACTTCGGAGTGGATGTTTTCAATAGCGATCTGAAAGCCATAGAAGCAACGAGCT 5427 Query 133246 TCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCG 133305 || |||||| ||||| | | ||| | | ||| || || || || |||||||| Sbjct 5428 TCAGGCACCTGAACTTCGTTGGAGAAGTTCATGGCCAAGTTCTCATTTACAATGCCGTCA 5487 Query 133306 CTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC 133365 |||||||| || || ||||||||| ||||||| |||||||||||| | | | Sbjct 5488 GACGCGGCGAAGAACGCAAGCACGTGCGTGATGAAGAAGCGCTCGTTGTCCGTGAGCTTC 5547 Query 133366 TCCCAGTCGCGCGTGTCCTTGGAC-AGGTCCACCTCCTCGACGGTCCAAAACGACGCCTC 133424 |||||||| | | | ||||| || || | || ||| | ||||| || |||||| Sbjct 5548 TCCCAGTC-CTTCAGATCGTGGACGAGATCGAGTTCTTCGGCTGTCCAGAAGCTCGCCTC 5606 Query 133425 GGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCG 133484 ||| || |||||||| ||||| |||| || || || || || | ||| || ||| Sbjct 5607 GGCCTTCTTGTACATTTCCCACACATCCGCATGCTGGATCGGGAAGAGCACGAAGCGGTT 5666 Query 133485 GGGGTTTTC 133493 |||||| || Sbjct 5667 GGGGTTCTC 5675 >seq1051 Length=134064 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| |||||||| ||||||||| |||| |||||| | | Sbjct 119730 ATGCAAATCTTCGTCAAGACGCTGACGGGCAAGACCATCACCCTCGATGTCGAGCCGTCG 119789 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | |||| | || | || |||| ||||| ||||| |||||| | || || Sbjct 119790 GACTCCATTGACAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCA 119848 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 119849 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 119908 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| ||||||| || | ||||| || || | || ||| Sbjct 119909 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCGCCTGCGCGGTGGC 119957 Score = 150 bits (166), Expect = 2e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| |||||||| ||||||||| |||| |||||| | | Sbjct 119958 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACCCTCGATGTCGAGCCGTCG 120017 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | |||| | || | || |||| ||||| ||||| |||||| | || || Sbjct 120018 GACTCCATTGACAACG-TGAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCA 120076 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 120077 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 120136 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||||||| || | ||||| || | | ||||||| Sbjct 120137 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCGCCTCCGTGGCGGCC 120186 >seq389 Length=167588 Score = 152 bits (168), Expect = 5e-32 Identities = 165/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || |||||||| ||||| || ||||| ||||||||||| | || Sbjct 110547 ATGCAAATCTTCGTCAAGACGCTCACCGGCAAGACGATCACGCTCGACGTCGAGCCGTCC 110488 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | || |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 110487 GACTCGATTGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 110429 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || ||||| ||||| || |||| ||||| || | ||||||||| Sbjct 110428 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTGAGCGACTACAA 110369 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| ||||||| || | || ||||| Sbjct 110368 CATCCAGAAGGAGTCGACGCTCCACCTCGTCCTGCG 110333 >seq880 Length=46309 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| |||||||| ||||||| ||| || | Sbjct 27234 ATGCAGATCTTCGTCAAGACCTTGACGGGCAAGACCATCACGCTCGACGTGGAGCCCTCG 27175 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | || |||| | || | || |||| ||||| ||||| || ||| | || || Sbjct 27174 GACTCGATTGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCA 27116 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| ||||||||| |||||||| Sbjct 27115 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 27056 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| ||||||| || | ||||| || Sbjct 27055 CATCCAGAAGGAGTCGACGCTTCACCTTGTGCTCCG 27020 >seq2606 Length=15791 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | ||||| || |||||||| ||||||||||| | | Sbjct 3370 ATGCAGATCTTCGTCAAGACTTTGACGGGTAAGACCATCACGCTCGACGTCGAGCCTTCG 3429 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | |||| | || | || |||| ||||| ||||| || ||| | || || Sbjct 3430 GACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCA 3488 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 3489 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGCACCCTTTCGGACTACAA 3548 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 |||||| ||||| ||||||| || Sbjct 3549 CATCCAGAAGGAGTCGACGCTTCA 3572 >seq1567 Length=70164 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || | || ||||| |||||||| ||||||| ||| || Sbjct 50029 AATATGCAGATTTTCGTCAAGACTTTGACTGGCAAGACCATCACGCTCGACGTTGAGCCC 49970 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | ||| | | |||| | || | || |||| ||||| ||||| || ||| | || Sbjct 49969 TCGGACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCCCCGGA 49911 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| ||||| | ||| ||||| ||||| || || | ||||| || | |||||| Sbjct 49910 TCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTGAGCGACTA 49851 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCA 38446 ||||||||| ||||| ||||||| || Sbjct 49850 CAACATCCAGAAGGAGTCGACGCTCCA 49824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500153655886080