Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1616 109 4e-19 >seq1616 Length=68031 Score = 109 bits (120), Expect = 4e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 30237 CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAG 30296 |||||| | || || | || |||||| ||||||||||||| | || || || ||| Sbjct 56732 CTTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGATGCCTTTGTCCTGGAG 56673 Query 30297 CTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCA 30356 | |||| ||| ||| || |||| |||||||||||||||||| ||||| ||||||| Sbjct 56672 CGTCTTGGCGTTGGTGTTGCCGCTGATGAACCACAGCAGCTCCTCAGCGACGCCCTTCCA 56613 Query 30357 AAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386 || || | |||||||||||| || ||||| Sbjct 56612 GAACACGCGCTTGGTCGTGAGCAGCGGAAA 56583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408602351157326