Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq400 268 2e-66 seq2528 192 1e-43 >seq400 Length=224259 Score = 268 bits (296), Expect = 2e-66 Identities = 719/1082 (66%), Gaps = 37/1082 (3%) Strand=Plus/Minus Query 212909 GTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGG 212968 |||||| ||| || || || | ||||| | || | ||| | ||| || ||| | || Sbjct 137108 GTTGACGATCGTAAATTCGCCCGCAAGCACGCGCCGCGAGTACATGTTGGACGTGAATGG 137049 Query 212969 CTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCAC 213028 ||||||| |||||||| || || ||||| || || || |||||||| || |||| Sbjct 137048 CTCGATGGATTCGTTGTTGCCGAGGATCTGGGCTGTCGATGCCGTGGGCATCGGCGCCAG 136989 Query 213029 CAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGA-AGCTCTGCCCAGTCCC 213087 ||| ||| ||| | ||| || || | | | | |||| ||| |||||||||| Sbjct 136988 CAGTAGAGAGTTGCGCACGCCATGAGCAGCCACCTG-CGCCTTGAGCGTCGCCCAGTCCC 136930 Query 213088 ATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGC 213147 | ||| ||| |||| ||| ||||||||| |||| ||| ||| | | Sbjct 136929 AG-----AGATCAGTCGGCGTCA--CACC--CCACATGTCGTACTGGAAGCGGCCCTGGG 136879 Query 213148 TCACGGGGCTGCCCTG-GTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 ||||| | ||| | ||| | ||||||||| ||| |||||| ||||| || Sbjct 136878 AGACGGG-CGACCCGGAGTACGTCTCGTAGGGGCCGAGCTGCTTGGCGAGCTCCATCGAA 136820 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 | || || | |||| |||||| || ||||| |||| ||||||||||||||||||| Sbjct 136819 GTCTCCATAGAGGCGTGGTAGATCGTCTCAAAGATCTGGATGTTGAGCTTCTTGGCCTCG 136760 Query 213267 GGGGACGTGAA-GGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 || ||| ||| ||| | | |||| | ||| |||| || || |||||||| ||||| Sbjct 136759 GGCGACTCGAACGGGTAGC-CCATGAGGATGAAGGCATCCGCGAGGCCCTGGACACCGAT 136701 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 ||||| ||| | ||| | || ||| ||| | || |||||| | ||||| ||||| Sbjct 136700 GCCGACGGGGCGGTGGCGCATGTTGCTGTTGCGCGC-CTCCTCGATCGGGTAGTAGTTGA 136642 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 ||| || | |||||| | |||||||||| | | |||||||| | | |||| | Sbjct 136641 CGTCAATCACCTTGTTCAAGTTGCGGGTGACGATCTTGGTGACCTTGTGGAGGTTC---- 136586 Query 213445 GATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGC 213504 || || || || | ||||| ||||||| | || || ||| || ||||||| Sbjct 136585 --TTAAAGTCGAAGACACCGTCAGTAACAAACTTGGAGAGCGCAATGGACGCGAGGTTGC 136528 Query 213505 AAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATC 213564 | || || ||||| | | |||||||| |||| ||| ||| ||||| |||| Sbjct 136527 ACACAGCGACCTCGTCCTTGCTCGTGTACTCGATGACTTCGCAGCAAAGGTTACTGCTCT 136468 Query 213565 GGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGT 213624 ||| || || |||||||| ||||| ||||| | ||| | |||||||| ||||||| Sbjct 136467 TGATCGTACCAAGGTTCTGCTGGTTCGACTTGGAATTGCACGCGTCCTTGTAAAGCATGT 136408 Query 213625 AGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGA 213684 |||| | || ||||| | ||| || | || ||| ||| || | |||||||| Sbjct 136407 AGGGCGTGCCAGTCTCGATCTGCGAATCGAGCATCGCAAACCACAGCTGTTGGGCCTTGA 136348 Query 213685 CCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGT 213744 || | || ||| | | |||||||||| |||| ||| | | ||| ||| Sbjct 136347 TGAC---CTTGCGAGCGCGACCCTCTGCCTCGTACTTGGCGTACAGCGCTTCGAACTCGG 136291 Query 213745 GGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCG---GGACACATGAGGCTCCAGTCCC 213801 ||||||| | | || || || || | || || || | ||||||||| |||| Sbjct 136290 CGCCCCAGCAGTCGGCGAGACCAGG---GGCTTCGTTCGGGCAAAAGAGGCTCCACTCCC 136234 Query 213802 CG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCC 213860 || | ||| ||| | || ||||||||| || |||| ||||| || ||| ||||| Sbjct 136233 CGTTGGACTC-GACGCGCTTCATGAACAGATCGGGGATCCACATGGCATAGAAGAGGTCG 136175 Query 213861 CTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCC 213920 | | | | || || ||| || || || || || || || || ||| Sbjct 136174 CGCGCGCGGTGCAGTTCGTTGCCGTGGTTCTTCTTGAGGTCAAGGAACTCGAAAATATCC 136115 Query 213921 GCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCC 213977 |||||||||||||| | ||| |||||||| | |||| || ||| ||||| |||||| Sbjct 136114 GCGTGCCACGGCTCAAGGTACATGGCAAAAGAGCCCTTCCGCTTACCACCGCCTTGGTCC 136055 Query 213978 AC 213979 || Sbjct 136054 AC 136053 >seq2528 Length=14935 Score = 192 bits (212), Expect = 1e-43 Identities = 565/863 (65%), Gaps = 27/863 (3%) Strand=Plus/Plus Query 47842 GTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCAT 47901 ||| || || || | ||||| |||||||| ||||| |||| | ||||| | ||||| Sbjct 4791 GTACTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGGGAGATCATATCCAT 4850 Query 47902 GAAGAGGAAGGGGTTG--GGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGG 47959 || ||| ||||| || ||| | | ||| | ||| | | || ||| Sbjct 4851 CCAGTCGAATGGGTTCTTGGCGTGGAAGAGCTTGGTGGC--GCCAAGGGCGTTGAGAAGG 4908 Query 47960 TGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG--G 48017 | || ||| | | |||||||||| ||||||| || ||||||||| ||||| | Sbjct 4909 CGGTCGGCGCAGAATTCGATGTATTGGCACATGAGCGTCGAGTTCATGCCGATGAGTTCG 4968 Query 48018 ACACGGGCAAAGCCTTTGTGAGA--AACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 ||| || ||| || || | |||| |||||| |||| ||||| || || | || Sbjct 4969 ACAGGG----AGCGATTCGGAAACGAACTGCTTCTCGATCTCGACGGCGTCACCGATGAT 5024 Query 48076 CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 || | | ||| | |||| | |||||| | | |||| | || | | |||||| Sbjct 5025 CTCATGGATGCGCTCGTTTGAGAGCTTGTTG---ATGAGCTTCGAGTACATGAGGCAGGC 5081 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 ||||| | ||| | ||||||||| || ||||||| | || || |||| | || || Sbjct 5082 GAAGTCGCAGTGAAGGCCTTCGTCGCGCGAGATGAGCTCATTCGAAAAGCTCAAGCCCGG 5141 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||||| || | || ||||||||||| || | ||| |||||||||||||| ||||| Sbjct 5142 CATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCAGAGAAGAAAATGCC 5201 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 || || || ||||| || || | || || ||| |||| | | || | ||| Sbjct 5202 TTCGACAGCAGCGAAGGCAACGATGCGTTCGGCGTAAGCAGCGATTTGGTTGTTGCACCA 5261 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG---AA 48372 |||||||| | ||||| || || || || ||||| || ||||| ||| | Sbjct 5262 CTTGAGCGCCCACTGGGCCTTGCGCTGGACACACGGGATCGTGTCGATGGCGCGGAGCAC 5321 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACAT 48429 | | | ||| |||| | | |||| | || || | | || ||| | ||| | Sbjct 5322 GCGGTCCTT---CTCAACCGTGTCCTTGATGTACGTGTCAATAAGTAGC---GAGTAGAC 5375 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 || ||||| | || || ||||||||||| || || |||||| | || ||| ||| Sbjct 5376 TTCGGAGTGGATGTTTTCAATAGCGATCTGAAAGCCATAGAAGCAACGAGCTTCAGGCAC 5435 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 ||| ||||| ||||||| || || |||||||| || || || || || || || Sbjct 5436 CTGAACTTCGTTGGAGAAGTTCATGGCCAAGTTCTCATTTACAATGCCGTCAGACGCGGC 5495 Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCC 48609 ||||| ||||| || || | | ||| ||||||||||| ||||| | |||| | Sbjct 5496 GAAGAACGCAAGCACGTGCGTGATGAAGAAGCGCTCGTTGTCCGTGAGCTTCTCCCAGTC 5555 Query 48610 CTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTT 48669 || | || | | | || || | |||||| | ||||||||| ||| || || || Sbjct 5556 CTTCAGATCGTGGACGAGATCGAGTTCTTCGGCTGTCCAGAAGCTCGCCTCGGCCTTCTT 5615 Query 48670 GTACATGCCCCATATGTCCGGAT 48692 |||||| |||| | |||| || Sbjct 5616 GTACATTTCCCACACATCCGCAT 5638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931497145582080