Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2346 127 6e-24 seq2183 86.0 2e-11 seq724 86.0 2e-11 >seq2346 Length=33220 Score = 127 bits (140), Expect = 6e-24 Identities = 199/282 (71%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643 |||| | ||||||||| || || || || | || || || || ||||| || ||| Sbjct 28009 TTGACAAGACGACGCTGGATGTAGCCCGTCTCGGCCGTCTTAACGGCGGTATCGATAAGA 28068 Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAA 302702 || ||||||||||||| ||||| ||||| | ||| | ||| ||| | ||| | | Sbjct 28069 CCTTCACGACCACCCATGGCATGAAAGAAAAACTCCTGCGG-CGTCAAGCCCTTGAGGTA 28127 Query 302703 GGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAG 302762 ||| |||| ||||| || |||| ||||||| |||| |||| |||| ||||| Sbjct 28128 CGAGTTCTCGACGAAGCCCCGCGACTCGGGCCCGAGGTCGTCCTTGCCGTAGTGCGGCAG 28187 Query 302763 GGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCA 302822 || | || | ||||||| || || ||||| || || ||||||||||| || | ||| Sbjct 28188 CGTGCGGTGGTTGAAGCCGTACGGAATGCGCTTGCCTTCGACGTTCTGCTGCCCGACGCA 28247 Query 302823 CGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 || ||| ||||||||||| || | | ||||||||| || Sbjct 28248 CGCAATAATCTGCGAAATGTTAAGGTACGAGCCCTTGGAACC 28289 >seq2183 Length=1368 Score = 86.0 bits (94), Expect = 2e-11 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 409106 CCTCCATAGCTCAGTTGGTCAGAGCGTGCGGCTGTTAACCGCGAGGTCACCGGTTCGAAA 409165 |||| |||||||||||||| ||||||| ||||||||||||| |||||| | |||||||| Sbjct 992 CCTCTATAGCTCAGTTGGT-AGAGCGTACGGCTGTTAACCGTGAGGTCGCAGGTTCGAAC 934 Query 409166 CCGGTTGGAGGCGTTTT 409182 || | |||||| || || Sbjct 933 CCTGCTGGAGGAGTCTT 917 Score = 86.0 bits (94), Expect = 2e-11 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 409297 CCTCCATAGCTCAGTTGGTCAGAGCGTGCGGCTGTTAACCGCGAGGTCACCGGTTCGAAA 409356 |||| |||||||||||||| ||||||| ||||||||||||| |||||| | |||||||| Sbjct 992 CCTCTATAGCTCAGTTGGT-AGAGCGTACGGCTGTTAACCGTGAGGTCGCAGGTTCGAAC 934 Query 409357 CCGGTTGGAGGCGT 409370 || | |||||| || Sbjct 933 CCTGCTGGAGGAGT 920 >seq724 Length=1056 Score = 86.0 bits (94), Expect = 2e-11 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 409106 CCTCCATAGCTCAGTTGGTCAGAGCGTGCGGCTGTTAACCGCGAGGTCACCGGTTCGAAA 409165 |||| |||||||||||||| ||||||| ||||||||||||| |||||| | |||||||| Sbjct 569 CCTCTATAGCTCAGTTGGT-AGAGCGTACGGCTGTTAACCGTGAGGTCGCAGGTTCGAAC 511 Query 409166 CCGGTTGGAGGCGTTTT 409182 || | |||||| || || Sbjct 510 CCTGCTGGAGGAGTCTT 494 Score = 86.0 bits (94), Expect = 2e-11 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 409297 CCTCCATAGCTCAGTTGGTCAGAGCGTGCGGCTGTTAACCGCGAGGTCACCGGTTCGAAA 409356 |||| |||||||||||||| ||||||| ||||||||||||| |||||| | |||||||| Sbjct 569 CCTCTATAGCTCAGTTGGT-AGAGCGTACGGCTGTTAACCGTGAGGTCGCAGGTTCGAAC 511 Query 409357 CCGGTTGGAGGCGT 409370 || | |||||| || Sbjct 510 CCTGCTGGAGGAGT 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471759857835894