Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1567 98.7 9e-16 seq389 86.0 6e-12 >seq1567 Length=70164 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||||||| || || ||| |||||||| || |||| Sbjct 49833 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 49892 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| ||||| || || ||||| || || || || || || || | Sbjct 49893 AAGATGAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTGACG 49952 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | | || | ||||| || |||| ||| | || || ||||||| ||| || Sbjct 49953 TTGTCGATCGAGTCCGAGGGCTCAACGTCGAGCGTGATGGTCTTGCCAGTCAAAGTCTTG 50012 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 50013 ACGAAAATCTGCAT 50026 >seq389 Length=167588 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||||||| || || || || ||||| || |||| | Sbjct 110354 GACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCA 110413 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || || || ||||| || || || || || || || | Sbjct 110414 AAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTGACG 110473 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | | |||| |||||| || |||| ||| | ||| || || || || || || Sbjct 110474 TTGTCAATCGAGTCGGACGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTGAGCGTCTTG 110533 Query 132110 ATGAAAATCTGCATG 132124 | ||| || |||||| Sbjct 110534 ACGAAGATTTGCATG 110548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476592957706320