Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1616 107 2e-18 >seq1616 Length=68031 Score = 107 bits (118), Expect = 2e-18 Identities = 308/491 (63%), Gaps = 81/491 (16%) Strand=Plus/Minus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 || |||||||||||||| ||| || |||||||| || | ||| | ||||| || Sbjct 57287 AGCGGCTCCACGTGGTTCGAGTACACATGCGCGTCGCCGATCACGTGGATGAAGTCGCCA 57228 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTG 147039 | |||||| ||| || || | |||| || ||||||| |||||| || |||||| Sbjct 57227 GCGCGGAGGCCGCACACCTGCGCGATCATGCGCGTAAGCAGCGCGTAGCTCGCGATGTTG 57168 Query 147040 AAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTA---------------------- 147077 |||||||| || ||||||||||| | || | |||||| Sbjct 57167 AAGGGGACGCCGAGGCCCATGTCGGCGGAGCGCTGGTACATCTACGCAGCGCTTAGCGCC 57108 Query 147078 -----------------CAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCAC 147120 || ||||||||| ||||| || | || |||||||||||||| Sbjct 57107 TCGCATTCCGCCGCCCGCACCTGGCACGACAGCTCGCCATTCGCAACGTAAAACTGGCAG 57048 Query 147121 AGGATGTGGCACGGCGGCAGCGCCAT---GGCG-------------------GGCAGGT- 147157 | ||||||||||||||||| ||||| | || ||| ||| Sbjct 57047 AACATGTGGCACGGCGGCAGGGCCATCAAGCCGAGATCTACGCCACCGCTGAGGCCGGTG 56988 Query 147158 -----------------CCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGG 147200 ||| |||||||||||||||| | | || | | || || Sbjct 56987 CTGCGCGCGCCTCGTACCCGACGGGTTCCAGGCCGAGAGAAGAATACGACGGTCGTCCGG 56928 Query 147201 GTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTT 147260 ||| |||| | ||| || |||||||| |||||||||||| ||||| Sbjct 56927 CGAGTGCTTGATCTTGTGGATGACGTCTGCGAGCTGGTCGACGCCCTGGCCCGAGTAGTC 56868 Query 147261 TGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCC 147319 || ||| ||| |||||| ||||||||||||| | ||| ||||||||||| || |||| Sbjct 56867 GGT-GTGCATGTCGACGTACGTGGCCCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGCC 56809 Query 147320 CCAGGTCGCCG 147330 | ||||||||| Sbjct 56808 CGAGGTCGCCG 56798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583465666996800