Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2528 113 6e-20 >seq2528 Length=14935 Score = 113 bits (124), Expect = 6e-20 Identities = 369/568 (65%), Gaps = 9/568 (2%) Strand=Plus/Plus Query 39609 ACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAA 39668 |||| | |||||||||||| || || ||||| || || | || | || || |||| Sbjct 5069 ACATGAGGCAGGCGAAGTCGCAGTGAAGGCCTTCGTCGCGCGAGATGAGCTCATTCGAAA 5128 Query 39669 ATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCA 39727 | | | || ||||| ||||| ||||| |||||||| || |||| |||| || || ||| Sbjct 5129 AGCTCAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGG-AGCAGAAGGAGCCA 5187 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TA 39784 || ||||| |||||||| || || || || ||||| | | || ||||| | | Sbjct 5188 GAGAAGAAAATGCCTTCGACAGCAGCGAAGGCAACGATGCGTTCGGCGTAAGCAGCGATT 5247 Query 39785 TCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 | || | |||||| | ||||| | || || || ||||| || || || || Sbjct 5248 TGGTTGTTGCACCACTTGAGCGCCCACTGGGCCTTGCGCTGGACACACGGGATCGTGTCG 5307 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 || || | | | || ||| | | || || | || || || || | || Sbjct 5308 ATGGCGCGGAGCACGCGGTCCTTCTCAACCGTGTCCTTGATGTACGTGTCAATAAGTAGC 5367 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 || | ||| || |||||||||||||| || |||||||| || || || || | ||| Sbjct 5368 GAGTAGACTTCGGAGTGGATGTTTTCAATAGCGATCTGAAAGCCATAGAAGCAACGAGCT 5427 Query 39965 TCAGTAATTTGTACCTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCAT 40022 |||| | || || || || | || || | ||||| || ||||| || || || | Sbjct 5428 TCAGGCACCTGAACTTCGTTGGAGAAGTTCAT--GGCCAAGTTCTCATTTACAATGCCGT 5485 Query 40023 CACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATT 40082 || ||||| || || || | || || | || || | || | | || | | Sbjct 5486 CAGACGCGGCGAAGAACGCAAGCACGTGCGTGATGAAGAAGCGCTCGTTGTCCGTGAGCT 5545 Query 40083 TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCT 40142 | | |||||| || | ||| | | ||| | |||||| |||||||| || ||||| Sbjct 5546 TCTCCCAGTCCTTCAGATCGTGGACGAGATCGAGTTCTTCGGCTGTCCAGAAGCTCGCCT 5605 Query 40143 CTGCCTTTTTGTACATGTTCCATATATC 40170 | ||||| |||||||| | ||| | ||| Sbjct 5606 CGGCCTTCTTGTACATTTCCCACACATC 5633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686882508565680