Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2528 113 4e-20 >seq2528 Length=14935 Score = 113 bits (124), Expect = 4e-20 Identities = 288/431 (67%), Gaps = 7/431 (2%) Strand=Plus/Minus Query 43856 GCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAA 43915 ||||| || || ||| ||||| || || ||||| || |||| | || | | Sbjct 5504 GCGTTCTTCGCCGCGTCTGACGGCATTGTAAATGAGAACTTGGCCATGAACTTCTCCAAC 5445 Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 |||||||| | || ||||| || || || ||||| ||||| || || || ||||| || Sbjct 5444 GAAGTTCAGGTGCCTGAAGCTCGTTGCTTCTATGGCTTTCAGATCGCTATTGAAAACATC 5385 Query 43976 CATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCAT 44035 || || ||| | ||| || || || || ||||||||||| || | |||||| | Sbjct 5384 CACTCCGAAGTCTACTCGCTACTTATTGACACGTACATCAAGGACACGGTTGAGAAGGAC 5325 Query 44036 CGATTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCT 44094 || || | || || || || | || || | | | | || || | ||||| || Sbjct 5324 CGCGTGCTCCGCGCCATCGACACGATCCCGTGTG-TCCAGCGCAAGGCCCAGTGGGCGCT 5266 Query 44095 TAAATGGATAAATT--CAAAT-GATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGT 44151 || ||| || ||||| | | ||| | ||||| | || || || || | ||| Sbjct 5265 CAAGTGGTGCAACAACCAAATCGCTGCTTACGCCGAACGCATCGTTGCCTTCGCTGCTGT 5206 Query 44152 GGAAGGCATTTTCTTTTCAGGATCGTT-TGCGGCCATATTTTGGTTAAAGAAACGAGGTT 44210 |||||||||||||| || || || || ||| |||| || ||| | ||||| || ||| Sbjct 5205 CGAAGGCATTTTCTTCTCTGGCTCCTTCTGC-TCCATCTTCTGGCTCAAGAAGCGCGGTC 5147 Query 44211 TGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCG 44270 | ||||| || |||| ||||| |||||| | || || || |||||| | || |||| Sbjct 5146 TCATGCCGGGCTTGAGCTTTTCGAATGAGCTCATCTCGCGCGACGAAGGCCTTCACTGCG 5087 Query 44271 ATTTTGCTTGC 44281 | || || ||| Sbjct 5086 ACTTCGCCTGC 5076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397441167687310