Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1616 141 8e-29 >seq1616 Length=68031 Score = 141 bits (156), Expect = 8e-29 Identities = 180/247 (73%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 34126 GATCCTCAGGGAGGGCTACCGGAAGGGGGACCGGACCGGGACGGGGACCCTCTCCGTGTT 34185 ||| ||| ||||||| || ||||| ||||| || || ||||| |||||||| | || Sbjct 56486 GATTCTCCAGGAGGGCGTGCGCAAGGGTGACCGCACGGGCACGGGCACCCTCTCGCTCTT 56545 Query 34186 CGGCACACAGGCCCGATACAACCTTCGGGGCGAA---TTTCCGCTGCTGACGACGAAACG 34242 |||| | ||| || | |||||| || ||| ||||||||||| ||||| || || Sbjct 56546 CGGCGCGCAGATGCGCTTCAACCTGCGCCACGACGTCTTTCCGCTGCTCACGACCAAGCG 56605 Query 34243 TGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACAC 34302 |||| |||||||||||| | |||||||||||||||||| | || || ||| ||| | Sbjct 56606 CGTGTTCTGGAAGGGCGTCGCTGAGGAGCTGCTGTGGTTCATCAGCGGCAACACCAACGC 56665 Query 34303 CAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCT 34362 |||| |||| | | || | ||||||||||||| |||| || || || || || Sbjct 56666 CAAGACGCTCCAGGACAAAGGCATCAAGATCTGGGACGGCAACGGCTCGCGCGAGTTCCT 56725 Query 34363 GGACAAG 34369 |||||| Sbjct 56726 CGACAAG 56732 Score = 141 bits (156), Expect = 8e-29 Identities = 180/247 (73%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 6976 CTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAG 7035 |||||| || || || || || |||| ||||||||||||| | || | | ||| Sbjct 56732 CTTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGATGCCTTTGTCCTGGAG 56673 Query 7036 CTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCA 7095 | ||||| ||| ||| || || | |||||||||||||||||| | ||||||||||| Sbjct 56672 CGTCTTGGCGTTGGTGTTGCCGCTGATGAACCACAGCAGCTCCTCAGCGACGCCCTTCCA 56613 Query 7096 GTACACACGTTTCGTCGTCAGCAGCGGAAA---TTCGCCCCGAAGGTTGTATCGGGCCTG 7152 | |||| || || ||||| ||||||||||| ||| || |||||| | || ||| Sbjct 56612 GAACACGCGCTTGGTCGTGAGCAGCGGAAAGACGTCGTGGCGCAGGTTGAAGCGCATCTG 56553 Query 7153 TGTGCCGAACACGGAGAGGGTCCCCGTCCCGGTCCGGTCCCCCTTCCGGTAGCCCTCCCT 7212 | |||||| | |||||||| ||||| || || ||||| ||||| || ||||||| Sbjct 56552 CGCGCCGAAGAGCGAGAGGGTGCCCGTGCCCGTGCGGTCACCCTTGCGCACGCCCTCCTG 56493 Query 7213 GAGGATC 7219 ||| ||| Sbjct 56492 GAGAATC 56486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448245242756640