Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2528 102 7e-17 >seq2528 Length=14935 Score = 102 bits (112), Expect = 7e-17 Identities = 370/574 (64%), Gaps = 4/574 (1%) Strand=Plus/Plus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAA 4606 || || || || || || | |||||||| | || | || || || || ||||| | || Sbjct 5077 CAGGCGAAGTCGCAGTGAAGGCCTTCGTCGC-GCGAGATGAGCTCATTCGAAAAGCTCAA 5135 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 || ||||| | ||| | ||| || ||||| || || | | || || ||||| ||||| Sbjct 5136 GCCCGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCAGAGAAGAA 5195 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTT 4725 |||||||| || || || || || || | || || | | ||| | || || | Sbjct 5196 AATGCCTTCGACAGCAGCGAAGGCAACGATGCGTTCGGCGTAAGCAGC-GATTTGGTTGT 5254 Query 4726 TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785 | ||| || | ||||| | || || || || ||||| || |||| || ||| Sbjct 5255 TGCACCACTTGAGCGCCCACTGGGCCTTGCGCTGGACACACGGGATCGTGTCGATGGCGC 5314 Query 4786 TAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACA 4845 | | || |||| | ||| | || || ||||| || ||||| || | Sbjct 5315 GGAGCACGCGGTCCTTCTCAACCGTGTCCTTGATGTACGTGTCAATAAGTAGCGAGTAGA 5374 Query 4846 TTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA 4905 ||| || || || ||||| ||||| |||||||| || || ||||| | |||||| | | Sbjct 5375 CTTCGGAGTGGATGTTTTCAATAGCGATCTGAAAGCCATAGAAGCAACGAGCTTCAGGCA 5434 Query 4906 CTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965 | ||||||||||| | || | | ||||| || ||||| || |||||| || | Sbjct 5435 CCTGAACTTCGTTGGAGAAGTTCATGGCCAAGTTCTCATTTACAATGCCGTCAGACGCGG 5494 Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGT 5025 | || ||||| | || || | || ||| | | |||| | | || || | ||||| Sbjct 5495 CGAAGAACGCAAGCACGTGCGTGATGAAGAAGCGCTCGTTGTCCGTGAGCTTCTCCCAGT 5554 Query 5026 GGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTT 5085 || ||| | | ||| | |||||| | ||||| || ||| || || || | Sbjct 5555 CCTTCAGATCGTGGACGAGATCGAGTTCTTCGGCTGTCCAGAAGCTCGCCTCGGCCTTCT 5614 Query 5086 TGTACATAGACCAAATATCAGGATACTGAATCGG 5119 ||||||| ||| | ||| | || ||| ||||| Sbjct 5615 TGTACATTTCCCACACATCCGCATGCTGGATCGG 5648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427033663309646