Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2528 113 6e-20 >seq2528 Length=14935 Score = 113 bits (124), Expect = 6e-20 Identities = 381/588 (65%), Gaps = 13/588 (2%) Strand=Plus/Plus Query 46622 ACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAA 46681 |||| | || || || || || ||||||||||| || | || | || || |||| Sbjct 5069 ACATGAGGCAGGCGAAGTCGCAGTGAAGGCCTTCGTCGCGCGAGATGAGCTCATTCGAAA 5128 Query 46682 ATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAG 46741 | | | || ||||| || || ||||| |||||||| || || | ||| || |||| Sbjct 5129 AGCTCAAGCCCGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAGGAGCCAG 5188 Query 46742 AAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCAT 46801 | ||||| |||||||| ||||| ||||| || || | | || ||||| ||| | Sbjct 5189 AGAAGAAAATGCCTTCGACAGCAGCGAAGGCAACGATGCGTTCGGCGTAA---GCAGCGA 5245 Query 46802 TATGAATC---CACCT-TTGAGC--CCAATCAGCCTTTTTCTTTACACAAGGCATTGTTT 46855 | || | |||| |||||| ||| | ||||| || ||||| || || || | Sbjct 5246 TTTGGTTGTTGCACCACTTGAGCGCCCACTGGGCCTTGCGCTGGACACACGGGATCGTGT 5305 Query 46856 CTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAA 46915 | || || | | || || ||| | | || || | || || || || | | Sbjct 5306 CGATGGCGCGGAGCACGCGGTCCTTCTCAACCGTGTCCTTGATGTACGTGTCAATAAGTA 5365 Query 46916 GACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTG 46975 | || | ||| || || |||||||||||||| |||||||| || || || || | | Sbjct 5366 GCGAGTAGACTTCGGAGTGGATGTTTTCAATAGCGATCTGAAAGCCATAGAAGCAACGAG 5425 Query 46976 CTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA--GACAAATTCTCATTCACTATTCC 47033 |||||| | ||| || || | | || ||||| | ||| |||||||| || || || Sbjct 5426 CTTCAGGCACCTGAACTTCGTTGGAGAA--GTTCATGGCCAAGTTCTCATTTACAATGCC 5483 Query 47034 ATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAG 47093 ||| || || || || || | || || | || || | || | | || || Sbjct 5484 GTCAGACGCGGCGAAGAACGCAAGCACGTGCGTGATGAAGAAGCGCTCGTTGTCCGTGAG 5543 Query 47094 TTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGC 47153 || | |||||| || | ||| | | ||| | |||||| ||||||||||| ||| Sbjct 5544 CTTCTCCCAGTCCTTCAGATCGTGGACGAGATCGAGTTCTTCGGCTGTCCAGAAGCTCGC 5603 Query 47154 CTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAA 47201 ||| || || || ||||| | ||| | ||| || |||||||| || Sbjct 5604 CTCGGCCTTCTTGTACATTTCCCACACATCCGCATGCTGGATCGGGAA 5651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712907112435840