Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq2026 102 3e-17 >seq2026 Length=89856 Score = 102 bits (112), Expect = 3e-17 Identities = 179/258 (69%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 31006 CATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGAA 31065 |||||||||||| ||| | ||||| || |||||||| || | | | || | Sbjct 81590 CATGCACATGTGCGTCGCTTCGATGACGACGCCGACGCCGAGAGCACCGATGGCCTTCAT 81649 Query 31066 CAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACAT 31125 || | | |||||| | | ||||| || |||||||||||||||||||| ||| | | Sbjct 81650 GAGGCCCTGCGCGATTTCGATCGTGAGGCGCTCCTGCACTTGCAGGCGGCGCGCAAAGAC 81709 Query 31126 GTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCTGAT 31185 |||| | ||| | |||||||||||||| | | || || || ||||| | ||| Sbjct 81710 ATCCGAGATGCGTGCAAGCTTGCTCAGGCCGAGCACCTTGCCATTGGGGATGTACCCGAT 81769 Query 31186 CGTG-ACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGT 31244 ||| ||| | || | || ||| | | ||||||||||||| | ||||||| |||| Sbjct 81770 -GTGCACCTTTCCCACGAAAGGCACCATGTGATGCTCGCAAAGCGAGTAGAGCTCAATGT 81828 Query 31245 CGCGCACCGTCACCATCT 31262 |||| || | ||||||| Sbjct 81829 CGCGGACAATGACCATCT 81846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187282789916032