Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achlya_20hypogyna_20[genbank_20GCA_5F002081595.1_202017-04-06] 3,062 sequences; 43,398,470 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq880 145 5e-30 seq1051 134 1e-26 seq389 131 1e-25 seq2606 118 8e-22 seq1567 102 6e-17 >seq880 Length=46309 Score = 145 bits (160), Expect = 5e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||||||||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 27025 CACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 27084 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | ||||||||||| | || | ||| ||||| ||| Sbjct 27085 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTG 27144 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||||||||| | | | || | ||| | || ||||| || | ||| || ||||| Sbjct 27145 GATCTTCTGCTTGACGTTGTCAATCGAGTCCGAGGGCTCCACGTCGAGCGTGATGGTCTT 27204 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||||| | |||||| |||||||| |||||||| Sbjct 27205 GCCCGTCAAGGTCTTGACGAAGATCTGCATGAT 27237 >seq1051 Length=134064 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | | ||| ||||| ||||| |||||| ||||||||||| || Sbjct 119960 CATGCCACCGCGCAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTC 119901 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| |||| || |||||||| ||||| ||||| | ||||||||||| | Sbjct 119900 CGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGG 119841 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||||||||||| | | |||| ||| | | || Sbjct 119840 GGGAATGCCCTCCTTGTCCTGGATCTTCTGCTTCACGTTGTCAATGGAGTCCGACGGCTC 119781 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || | || || ||||| ||||| || ||||| ||||||||||||||| Sbjct 119780 GACATCGAGGGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATTTGCATG 119729 Score = 129 bits (142), Expect = 4e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| ||||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 120167 CACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 120108 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | ||||||||||| | || | || ||||| ||| Sbjct 120107 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTG 120048 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||||||||||| | | |||| ||| | | || || || | || || ||||| Sbjct 120047 GATCTTCTGCTTCACGTTGTCAATGGAGTCCGACGGCTCGACATCGAGGGTGATGGTCTT 119988 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || ||||| |||||||| |||||| Sbjct 119987 GCCCGTCAGCGTCTTGACGAAGATCTGCATG 119957 >seq389 Length=167588 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| ||||||||||| ||| || ||| |||| || Sbjct 110339 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCCTCA 110398 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | |||||||| || | || | || ||||| ||| Sbjct 110399 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 110458 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||||||||| | | | || | ||||| | || || || | ||| |||||||| Sbjct 110459 ATCTTCTGCTTGACGTTGTCAATCGAGTCGGACGGCTCGACGTCGAGCGTGATCGTCTTG 110518 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||| ||||| ||||||||||||||| Sbjct 110519 CCGGTGAGCGTCTTGACGAAGATTTGCATG 110548 >seq2606 Length=15791 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||||||||| |||||| ||||||||||| || | || ||| |||| || Sbjct 3578 ACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCCTCA 3519 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||||| | || | || ||||| ||| Sbjct 3518 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGG 3459 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||||||||| | | | || | ||| | | || || || | ||| || ||||| Sbjct 3458 ATCTTCTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCGACGTCGAGCGTGATGGTCTTA 3399 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| | ||||| |||||||| |||||| Sbjct 3398 CCCGTCAAAGTCTTGACGAAGATCTGCATG 3369 >seq1567 Length=70164 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| ||||||||||| ||| || ||| | || || Sbjct 49818 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCATCCTCG 49877 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||||| | || | || ||||| ||| Sbjct 49878 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGG 49937 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||||||||| | | | || | ||| | || || || || | ||| || ||||| Sbjct 49938 ATCTTCTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCAACGTCGAGCGTGATGGTCTTG 49997 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| || ||||| Sbjct 49998 CCAGTCAAAGTCTTGACGAAAATCTGCAT 50026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359976965833254