Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1548 138 9e-28 >seq1548 Length=38083 Score = 138 bits (152), Expect = 9e-28 Identities = 207/294 (70%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 18893 TGTTATAGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAA 18952 ||| ||| | | | | ||||| ||| | | | ||||| || || |||| |||||| Sbjct 4405 TGTGATACACAAACTCAAAACTGACCAAAATTGTCGACGTATCATCTTATCCGGTTGGAA 4464 Query 18953 TCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT 19012 ||||| ||| | || ||||| | ||||||| ||||| | || || |||||||| Sbjct 4465 TCCAACCGATTTAGCCGAAATGGCATTACCTCCCTGTCATCTCATGTGCCAATTTTACGT 4524 Query 19013 TGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGT 19072 |||||| || |||||||| |||||| | |||||| |||| | ||||| || || || || Sbjct 4525 TGCAAATGGGGAATTATCATGCCAAATGTACCAGCGATCCGCTGATATTGGTCTGGGCGT 4584 Query 19073 ACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACT 19132 || ||||| |||||| | || || ||| | || | || | || || || || | || Sbjct 4585 TCCATTCAATATTGCTAGCTACGCGCTTTTGACAAAAATGATTGCACACGTGACTGATCT 4644 Query 19133 TAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCA 19186 || |||| || || ||||| || || ||||| ||||| ||| ||||||| Sbjct 4645 CCAACCCGGCGAGTTTGTTCATGTGATCGGAGATGCCCATATCTACATGAATCA 4698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399449793923985