Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F000313105.1_202012-11-06] 11,133 sequences; 32,990,475 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1548 100 2e-16 >seq1548 Length=38083 Score = 100 bits (110), Expect = 2e-16 Identities = 189/275 (69%), Gaps = 6/275 (2%) Strand=Plus/Minus Query 101638 AAGTGTTGGAAACGGTCTAGGAGTTCGCGTCAACT---GCATTTTAAGAGCATCAATGTG 101694 ||||||||||||||| | ||||| || |||| | || | | || | || | ||| Sbjct 4753 AAGTGTTGGAAACGGGCGTGGAGTGCGT-TCAAGTTGTGCCTGT--AGCGGTTCCAAGTG 4697 Query 101695 ATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGT 101754 || | ||||| || |||||||| || ||| | |||||| || || |||| ||| Sbjct 4696 ATTCATGTAGATATGGGCATCTCCGATCACATGAACAAACTCGCCGGGTTGGAGATCAGT 4637 Query 101755 GACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAA 101814 || || |||||||| || ||||| | ||||||||||| || ||||| || || | Sbjct 4636 CACGTGTGCAATCATTTTTGTCAAAAGCGCGTAGCTAGCAATATTGAATGGAACGCCCAG 4577 Query 101815 CCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAA 101874 || |||||||| |||| || |||| ||| || || | | |||| || ||||| Sbjct 4576 ACCAATATCAGCGGATCGCTGGTACATTTGGCATGATAATTCCCCATTTGCAACGTAAAA 4517 Query 101875 TTGACTTAATACATGACAAGGCGGCAACACCATTT 101909 ||| | | | |||||| || || || |||||| Sbjct 4516 TTGGCACATGAGATGACAGGGAGGTAATGCCATTT 4482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361202184195383